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Creating engaging and immersive data visualization tools has become increasingly significant for a wide range of users who want to display their data in a meaningful way. However, this can be limiting for individuals with varying levels of…

Human-Computer Interaction · Computer Science 2024-12-17 Tracy Bui , Kari Noe , Marissa Halim , Nurit Kirshenbaum , Jason Leigh

The Simulation Environment for Atomistic and Molecular Modeling (SEAMM) is an open-source software package written in Python that provides a graphical interface for setting up, executing, and analyzing molecular and materials simulations.…

The output of an automated theorem prover is usually presented by using a text format, they are often too heavy to be understood. In model checking setting, it would be helpful if one can observe the structure of models and the verification…

Logic in Computer Science · Computer Science 2017-02-16 Jian Liu , Ying Jiang , Yanyun Chen , Qing Zhou

Scientific applications produce a huge amount of data, which imposes serious management and analysis challenges. In particular, limitations in current database management systems prevent their adoption in simulation applications, in which…

Databases · Computer Science 2019-03-18 Hermano Lustosa , Fabio Porto

Novelpy (v1.2) is an open-source Python package designed to compute bibliometrics indicators. The package aims to provide a tool to the scientometrics community that centralizes different measures of novelty and disruptiveness, enables…

Digital Libraries · Computer Science 2022-11-21 Pierre Pelletier , Kevin Wirtz

Access to astronomical data through archives and VO is essential but does not solve all problems. Availability of appropriate software for analyzing the data is often equally important for the efficiency with which a researcher can publish…

Instrumentation and Methods for Astrophysics · Physics 2010-04-27 P. Grosbol , D. Tody

Visual representation of information is a fundamental tool for advancing our understanding of science. It enables the research community to extract new knowledge from complex datasets, and plays an equally vital role in communicating new…

Instrumentation and Methods for Astrophysics · Physics 2019-07-25 Robert Hurt , Ryan Wyatt , Mark Subbarao , Kimberly Arcand , Jacqueline K. Faherty , Janice Lee , Brandon Lawton

AsaPy is a custom-made Python library designed to simplify and optimize the analysis of aerospace simulation data. Instead of introducing new methodologies, it excels in combining various established techniques, creating a unified,…

Visual analytics (VA) systems have been widely used in various application domains. However, VA systems are complex in design, which imposes a serious problem: although the academic community constantly designs and implements new designs,…

Human-Computer Interaction · Computer Science 2024-02-27 Lu Ying , Aoyu Wu , Haotian Li , Zikun Deng , Ji Lan , Jiang Wu , Yong Wang , Huamin Qu , Dazhen Deng , Yingcai Wu

A recently introduced text classifier, called SS3, has obtained state-of-the-art performance on the CLEF's eRisk tasks. SS3 was created to deal with risk detection over text streams and, therefore, not only supports incremental training and…

Machine Learning · Computer Science 2020-07-21 Sergio G. Burdisso , Marcelo Errecalde , Manuel Montes-y-Gómez

The increasing importance of Computational Science and Engineering has highlighted the need for high-quality scientific software. However, research software development is often hindered by limited funding, time, staffing, and technical…

Software Engineering · Computer Science 2025-03-10 Armin Ariamajd , Raquel López-Ríos de Castro , Andrea Volkamer

The use of Python is noticeably growing among the scientific community, and Astronomy is not an exception. The power of Python consists of being an extremely versatile high-level language, easy to program that combines both traditional…

Instrumentation and Methods for Astrophysics · Physics 2018-07-16 Daniel M. Faes

Any cutting-edge scientific research project requires a myriad of computational tools for data generation, management, analysis and visualization. Python is a flexible and extensible scientific programming platform that offered the perfect…

Quantitative Methods · Quantitative Biology 2008-03-14 Julius B. Lucks

Large language models (LLMs) are rapidly increasing in capability, but they still struggle with highly specialized programming tasks such as scientific visualization. We present an LLM assistant, ChatVis, that aids the LLM to generate…

Human-Computer Interaction · Computer Science 2025-08-01 Tom Peterka , Tanwi Mallick , Orcun Yildiz , David Lenz , Cory Quammen , Berk Geveci

This paper describes TOBY, a visualization tool that helps a user explore the contents of an academic survey paper. The visualization consists of four components: a hierarchical view of taxonomic data in the survey, a document similarity…

TextDescriptives is a Python package for calculating a large variety of metrics from text. It is built on top of spaCy and can be easily integrated into existing workflows. The package has already been used for analysing the linguistic…

Computation and Language · Computer Science 2023-10-30 Lasse Hansen , Ludvig Renbo Olsen , Kenneth Enevoldsen

The usage of the high-level scripting language Python has enabled new mechanisms for data interrogation, discovery and visualization of scientific data. We present yt, an open source, community-developed astrophysical analysis and…

Instrumentation and Methods for Astrophysics · Physics 2011-12-21 Matthew J. Turk , Britton D. Smith

OdoViz is a reactive web-based tool for 3D visualization and processing of autonomous vehicle datasets designed to support common tasks in visual place recognition research. The system includes functionality for loading, inspecting,…

Computer Vision and Pattern Recognition · Computer Science 2021-07-19 Saravanabalagi Ramachandran , John McDonald

In this manuscript, we will introduce a recently developed program GPView, which can be used for wave function analysis and visualization. The wave function analysis module can calculate and generate 3D cubes for various types of molecular…

Chemical Physics · Physics 2020-01-08 Tian Shi , Ping Wang

The analysis of experimental results with Python often requires writing many code scripts which all need access to the same set of functions. In a common field of research, this set will be nearly the same for many users. The qspec Python…

Computational Physics · Physics 2025-03-18 Patrick Müller , Wilfried Nörtershäuser