Related papers: Intermediate range migration in the two-dimensiona…
Most cancers in humans are large, measuring centimeters in diameter, composed of many billions of cells. An equivalent mass of normal cells would be highly heterogeneous as a result of the mutations that occur during each cell division.…
Using the shape space of codons and tRNAs we give a physical description of the genetic code evolution on the basis of the codon capture and ambiguous intermediate scenarios in a consistent manner. In the lowest dimensional version of our…
The differential migration of two planets due to planet-disk interaction can result in capture into the 2:1 eccentricity-type mean-motion resonances. Both the sequence of 2:1 eccentricity resonances that the system is driven through by…
Homogeneous nucleation of a new phase near a second, continuous, transition, is considered. The continuous transition is in the metastable region associated with the first-order phase transition, one of whose coexisting phases is…
Phylogenetic mixture models, in which the sites in sequences undergo different substitution processes along the same or different trees, allow the description of heterogeneous evolutionary processes. As data sets consisting of longer…
In frustrated spin ladders the interplay of frustration and correlations leads to the familiar Haldane (H) and rung-singlet (RS) phases. The nature of the transition between these two phases is still under debate. In this paper we tackle…
We evaluate the implication and outlook of an unanticipated simplification in the macroscopic behavior of two high-dimensional sto-chastic models: the Replicator Model with Mutations and the Tangled Nature Model (TaNa) of evolutionary…
The dynamics of a population undergoing selection is a central topic in evolutionary biology. This question is particularly intriguing in the case where selective forces act in opposing directions at two population scales. For example, a…
A multi-phase field model is employed to study the microstructural evolution of an alloy undergoing liquid dealloying. The model proposed extends upon the original approach of Geslin et al. to consider dealloying in the presence of grain…
We model network formation when heterogeneous nodes enter sequentially and form connections through both random meetings and network-based search, but with type-dependent biases. We show that there is "long-run integration," whereby the…
A new set of stellar models in the mass range 1.2 to 9 $M_{\odot}$ is presented. The adopted chemical compositions cover the typical galactic values, namely $0.0001 \le Z \le 0.02$ and $0.23 \le Y \le 0.28$. A comparison among the most…
We investigated how the finiteness of the length of the sequence affects the phase transition that takes place at DNA melting temperature. For this purpose, we modified the Transfer Integral method to adapt it to the calculation of both…
In this paper, we consider Galton-Watson processes with immigration. Pick $i(\ge2)$ individuals randomly without replacement from the $n$-th generation and trace their lines of descent back in time till they coalesce into $1$ individual in…
We study the phase transition phenomena for long-range oriented percolation and contact process. We studied a contact process in which the range of each vertex are independent, updated dynamically and given by some distribution $N$. We also…
In this paper, we study the scaling limit of a class of random walks which behave like simple random walks outside of a bounded region around the origin and which are subject to a partial reflection near the origin. If the probability of…
The problem of intermediates in the fossil record has been frequently discussed ever since Darwin. The extent of `gaps' (missing transitional stages) has been used to argue against gradual evolution from a common ancestor. Traditionally,…
We study the mixing of chemical species in the interstellar medium (ISM). Recent observations suggest that the distribution of species such as deuterium in the ISM may be far from homogeneous. This raises the question of how long it takes…
This paper analyzes a random walk model for the level lines appearing in the entropic repulsion phenomena of three-dimensional discrete random interfaces above a hard wall; we are particularly motivated by the low-temperature (2+1)D…
We show that in any dimension $d\ge1$, the cycle-length process of stationary random stirring (or, random interchange) on the lattice torus converges to the canonical Markovian split-and-merge process with the invariant (and reversible)…
We consider trap models on Z^d, namely continuous time Markov jump process on Z^d with embedded chain given by a generic discrete time random walk, and whose mean waiting time at x is given by tau_x, with tau = (tau_x, x in Z^d) a family of…