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Water and water-mediated interactions determine thermodynamic and kinetics of protein folding, protein aggregation and self-assembly in confined spaces. To obtain insights into the role of water in the context of folding problems, we…

Soft Condensed Matter · Physics 2015-05-28 S. Vaitheeswaran , Jie Chen , D. Thirumalai

We study the effect of confinement in the dynamical behavior of a core-softened fluid. The fluid is modeled as a two length scales potential. This potential in the bulk reproduces the anomalous behavior observed in the density and in the…

Soft Condensed Matter · Physics 2015-06-04 José R. Bordin , Alan B. de Oliveira , Alexandre Diehl , Marcia C. Barbosa

Understanding and ultimately controlling the transformations and properties of nanoscale systems, from proteins to synthetic nanomaterial assemblies, is limited by the inability to uncover their dynamics on their characteristic length and…

This paper reviews recent Monte Carlo simulation studies of the glassy behavior in thin polymer films. The simulations employ a version of the bond-fluctuation lattice model, in which the glass transition is driven by the competition…

Soft Condensed Matter · Physics 2007-05-23 C. Mischler , J. Baschnagel , K. Binder

We have performed quantum Monte Carlo simulations measuring the finite size and temperature superfluid response of helium-4 to the linear and rotational motion of the walls of a nanopore. Within the two-fluid model, the portion of the…

Mesoscale and Nanoscale Physics · Physics 2013-09-04 B. Kulchytskyy , G. Gervais , A. Del Maestro

In systems with reduced dimensions quantum fluctuations have a strong influence on the electronic conduction, even at very low temperature. In superconductors this is especially interesting, since the coherent state of the superconducting…

We study the evolution of dynamic fluctuations averaged over different space lengths and time scales to characterize spatially and temporally heterogeneous behavior of TIP4P/2005 water in liquid and supercooled states. Analysing a million…

We explore superfluidity for $^4$He confined in a porous glass which has nanopores of 2.5 nm in diameter, at pressures up to 5 MPa. With increasing pressure, the superfluidity is drastically suppressed, and the superfluid transition…

Mesoscale and Nanoscale Physics · Physics 2007-05-23 K. Yamamoto , H. Nakashima , Y. Shibayama , K. Shirahama

The thermodynamics of solid/liquid interfaces under nanoconfinement has tremendous implications for liquid transport properties. Here using molecular dynamics, we investigate graphite nanoslits and study how the water/graphite interfacial…

Fluid Dynamics · Physics 2022-05-17 Zixuan Wei , Mara Chiricotto , Joshua D. Elliott , Fausto Martelli , Paola Carbone

By monitoring the quality factor of a quartz tuning fork oscillator we have observed a fluctuation-driven reduction in the viscosity of bulk $^3$He in the normal state near the superfluid transition temperature, $T_c$. These fluctuations,…

Superconductivity · Physics 2023-08-29 Rakin N. Baten , Yefan Tian , Eric N. Smith , Erich Mueller , Jeevak M. Parpia

Hydrated proteins undergo a transition in the deeply supercooled regime, which is attributed to rapid changes in hydration water and protein structural dynamics. Here, we investigate the nanoscale stress relaxation in hydrated lysozyme…

First, second and third nearest neighbor mixing potentials for FePt alloys, were calculated from first principles using a Connolly-Williams approach. Using the mixing potentials obtained in this manner, the dependency of equilibrium L1_0…

Materials Science · Physics 2016-08-31 R. V. Chepulskii , J. Velev , W. H. Butler

Hydrated excess protons under hydrophobic confinement are a critical component of charge transport behavior and reactivity in nanoporous materials and biomolecular systems. Herein excess proton confinement effects are computationally…

Soft Condensed Matter · Physics 2020-06-04 Xinyou Ma , Chenghan Li , Alex B. F. Martinson , Gregory A. Voth

The most accepted origin for the water anomalous behavior is the phase transition between two liquids (LLPT) in the supercooled regime connected to the glassy first order phase transition at lower temperatures. Two length scales potentials…

Soft Condensed Matter · Physics 2023-04-19 José Rafael Bordin , Leandro B. Krott

The low temperature physics of parahydrogen (ph2) confined in cylindrical channels of diameter of the order of 1 nm is studied theoretically by Quantum Monte Carlo simulations. On varying the attractive strength of the wall of the…

Chemical Physics · Physics 2016-03-09 Tokunbo Omiyinka , Massimo Boninsegni

We study the conformation and scaling properties of a self-avoiding fluid membrane, subject to an osmotic pressure $p$, by means of Monte Carlo simulations. Using finite size scaling methods in combination with a histogram reweighting…

Condensed Matter · Physics 2009-10-22 B. Dammann , H. C. Fogedby , J. H. Ipsen , C. Jeppesen

Nucleation in small volumes of water has garnered renewed interest due to the relevance of pore condensation and freezing under conditions of low partial pressures of water, such as in the upper troposphere. Molecular simulations can in…

Chemical Physics · Physics 2023-06-23 John A. Hayton , Michael B. Davies , Thomas F. Whale , Angelos Michaelides , Stephen J. Cox

This paper deals with the condensation of liquid droplets on hydrophobic and hydrophilic surfaces. A stochastic mesoscale model based on the theory of fluctuating hydrodynamics and the thermodynamics of a diffuse interface approach shows…

Soft Condensed Matter · Physics 2025-06-30 Matteo Teodori , Dario Abbondanza , Mirko Gallo , Carlo Massimo Casciola

Within the so-called "no-man's land" between about 150 and 235 K, crystallization of bulk water is inevitable. The glasslike freezing and a liquid-to-liquid transition of water, predicted to occur in this region, can be investigated by…

Soft Condensed Matter · Physics 2020-09-17 Jonas K. H. Fischer , Pit Sippel , Dmytro Denysenko , Peter Lunkenheimer , Dirk Volkmer , Alois Loidl

We have studied the molecular scale hydrophobicity of an apolar solute, argon, confined between hydrophobic planar surfaces with different confinement widths. Specifically, we find that the hydrophobicity exhibits a non-monotonic behavior…

Soft Condensed Matter · Physics 2015-01-27 Sudip Nepal , Pradeep Kumar