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Related papers: A tight binding model for water

200 papers

Dynamic structuring of water is a key player in a large class of processes underlying biochemical and technological developments today, the latter often involving electric fields. However, the anisotropic coupling between the water…

Soft Condensed Matter · Physics 2019-05-29 Andreas Baer , Zoran Miličević , David M. Smith , Ana-Sunčana Smith

A simple theory is proposed for the dispersive molecular binding of unusually high magnitude due to an enhanced polarizability. Two alternative ways have so far been considered in the literature leading to the polarizability enhancement:…

Soft Condensed Matter · Physics 2007-05-23 Mladen Georgiev , Alexander Gochev , Jai Singh

The performance of several popular water models (TIP3P, TIP4P, TIP5P and TIP4P/2005) is analysed. For that purpose the predictions for ten different properties of water are investigated, namely: 1. vapour-liquid equilibria (VLE) and…

Materials Science · Physics 2009-01-14 C. Vega , J. L. F. Abascal , M. M. Conde , J. L. Aragones

Water shapes and defines the properties of biological systems. Therefore, understanding the nature of the mutual interaction between water and biological systems is of primary importance for a proper assessment of biological activity and…

Soft Condensed Matter · Physics 2021-01-18 Fausto Martelli , Carles Calero , Giancarlo Fanzese

Water is a notoriously difficult substance to model both accurately and efficiently. Here, we focus on descriptions with a single coarse-grained particle per molecule using the so-called Approximate Non-Conformal (ANC) and generalized…

Soft Condensed Matter · Physics 2017-10-25 Tonalli Rodríguez-López , Yuriy Khalak , Mikko Karttunen

Using the Deep Potential methodology, we construct a model that reproduces accurately the potential energy surface of the SCAN approximation of density functional theory for water, from low temperature and pressure to about 2400 K and 50…

Chemical Physics · Physics 2021-06-16 Linfeng Zhang , Han Wang , Roberto Car , Weinan E

One of the main applications of atomistic computer simulations is the calculation of ligand binding energies. The accuracy of these calculations depends on the force field quality and on the thoroughness of configuration sampling. Sampling…

Computational Physics · Physics 2021-01-11 Valerio Rizzi , Luigi Bonati , Narjes Ansari , Michele Parrinello

The inter oxygen repulsion opposes compression minimizing the compressibility. Polarization enlarges the bandgap and the dielectric permittivity of water ice by raising the nonbonding states above the Fermi energy. Progress evidences the…

Chemical Physics · Physics 2020-08-10 Chang Q Sun

Despite the great advancement of experimental tools and theoretical models, a quantitative characterization of the microscopic structures of ion aggregates and its associated water hydrogen-bonding networks still remains a challenging…

Quantitative Methods · Quantitative Biology 2019-03-08 Kelin Xia

Water hydrogen bonding is extremely versatile; approximately 20 ice structures and several types of clathrate hydrate structures have been identified. These crystalline water structures form at temperatures below room temperature and/or at…

A gaussian distribution of binding energies, but conditioned to exploit generally available information on packing in liquids, provides a statistical-thermodynamic theory of liquid water that is structurally non-committal, molecularly…

Biological Physics · Physics 2007-05-23 J. K. Shah , D. Asthagiri , L. R. Pratt , M. E. Paulaitis

The Bernal-Fowler ice rules stipulate that each water molecule in an ice crystal should form four hydrogen bonds. However, in extreme or constrained conditions, the arrangement of water molecules deviates from conventional ice rules,…

Statistical Mechanics · Physics 2024-07-12 Pavan Ravindra , Xavier R. Advincula , Christoph Schran , Angelos Michaelides , Venkat Kapil

A theoretical model for the effect of water hydrogen bonding on the thermodynamics of hydrophobic hydration is proposed as a combination of the classical density functional theory with the recently developed probabilistic approach to water…

Statistical Mechanics · Physics 2011-06-16 Yuri S. Djikaev

A large number of water models exists for molecular simulations. They differ in the ability to reproduce specific features of real water instead of others, like the correct temperature for the density maximum or the diffusion coefficient.…

Soft Condensed Matter · Physics 2012-06-04 Roman Shevchuk , Diego Prada-Gracia , Francesco Rao

Thermodynamic properties of liquid water as well as hexagonal (Ih) and cubic (Ic) ice are predicted based on density functional theory at the hybrid-functional level, rigorously taking into account quantum nuclear motion, anharmonic…

Materials Science · Physics 2025-10-06 Bingqing Cheng , Edgar A. Engel , Jörg Behler , Christoph Dellago , Michele Ceriotti

Through Monte Carlo simulations and the Associating Lattice Gas Model, the phases of a two-dimensional fluid under hydrophilic confinement are evaluated. The model, in its unconfined version, reproduces the anomalous behavior of water…

One of the major obstacles to accurately model the interstellar chemistry is an inadequate knowledge about the binding energy (BE) of interstellar species with dust grains. In denser region of molecular cloud, where very complex chemistry…

Astrophysics of Galaxies · Physics 2018-07-25 Ankan Das , Milan Sil , Prasanta Gorai , Sandip K. Chakrabarti , Jean-Christophe Loison

In this paper we provide a highly accurate value for the binding energy of benzene to proton-ordered crystalline water ice (XIh), as a model for interstellar ices. We compare our computed value to the latest experimental data available from…

Earth and Planetary Astrophysics · Physics 2024-06-28 Victoria H. J. Clark , David M. Benoit , Marie Van de Sande , Catherine Walsh

Series of molecular dynamics simulations for 2-propanol-water mixtures, as a function of temperature (between freezing and room temperature) and composition (xip= 0, 0.5, 0.1 and 0.2) have been performed for temperatures reported in the…

Chemical Physics · Physics 2019-11-06 Szilvia Pothoczki , László Pusztai , Imre Bakó

Water shows numerous thermodynamic, dynamic, and structural anomalies. Recent experiments [Eichler et al. Phys. Rev. Lett. 134, 134101 (2025)], based on measurements of shear and bulk viscosities of liquid water up to 1.6 GPa, have reported…

Soft Condensed Matter · Physics 2026-01-27 José Martín-Roca , Alberto Zaragoza , Frédéric Caupin , Chantal Valeriani