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We present a new graph compressor that works by recursively detecting repeated substructures and representing them through grammar rules. We show that for a large number of graphs the compressor obtains smaller representations than other…

Data Structures and Algorithms · Computer Science 2017-04-19 Sebastian Maneth , Fabian Peternek

Graph partitioning (GP) is a classic problem that divides the node set of a graph into densely-connected blocks. Following the IEEE HPEC Graph Challenge and recent advances in pre-training techniques (e.g., large-language models), we…

Machine Learning · Computer Science 2024-09-04 Meng Qin , Chaorui Zhang , Yu Gao , Yibin Ding , Weipeng Jiang , Weixi Zhang , Wei Han , Bo Bai

The recent works on causal discovery have followed a similar trend of learning partial ancestral graphs (PAGs) since observational data constrain the true causal directed acyclic graph (DAG) only up to a Markov equivalence class. This…

Machine Learning · Computer Science 2026-03-03 Tingrui Huang , Devendra Singh Dhami

We introduce Graphical Algebraic Geometry (GAG), a family of diagrammatic languages extending the Graphical Linear Algebra programme. We construct several languages within this family and prove that they are universal and complete for the…

Quantum Physics · Physics 2026-05-15 Dichuan Gao , Razin A. Shaikh , Aleks Kissinger

We investigate the odd multiway node (edge) cut problem where the input is a graph with a specified collection of terminal nodes and the goal is to find a smallest subset of nonterminal nodes (edges) to delete so that the terminal nodes do…

Data Structures and Algorithms · Computer Science 2018-04-09 Karthekeyan Chandrasekaran , Matthias Mnich , Sahand Mozaffari

A traversal of a connected graph is a linear ordering of its vertices all of whose initial segments induce connected subgraphs. Traversals, and their refinements such as breadth-first and depth-first traversals, are computed by various…

Logic · Mathematics 2018-10-24 Siddharth Bhaskar , Anton Jay Kienzle

Learning a faithful directed acyclic graph (DAG) from samples of a joint distribution is a challenging combinatorial problem, owing to the intractable search space superexponential in the number of graph nodes. A recent breakthrough…

Machine Learning · Computer Science 2019-04-24 Yue Yu , Jie Chen , Tian Gao , Mo Yu

Graph classes of bounded tree rank were introduced recently in the context of the model checking problem for first-order logic of graphs. These graph classes are a common generalization of graph classes of bounded degree and bounded…

Discrete Mathematics · Computer Science 2025-10-08 Jakub Gajarský , Rose McCarty

In many situations, it would be useful to know not just the best phylogenetic tree for a given data set, but the collection of high-quality trees. This goal is typically addressed using Bayesian techniques, however, current Bayesian methods…

Populations and Evolution · Quantitative Biology 2023-10-27 Will Dumm , Mary Barker , William Howard-Snyder , William S. DeWitt , Frederick A. Matsen

A simple graph $G=(V,E)$ is word-representable if there exists a word $w$ over the alphabet $V$ such that letters $x$ and $y$ alternate in $w$ iff $xy\in E$. Word-representable graphs generalize several important classes of graphs. A graph…

Combinatorics · Mathematics 2019-10-03 Özgür Akgün , Ian P. Gent , Sergey Kitaev , Hans Zantema

A graph $G = (V, E)$ is said to be word-representable if a word $w$ can be formed using the letters of the alphabet $V$ such that for every pair of vertices $x$ and $y$, $xy \in E$ if and only if $x$ and $y$ alternate in $w$. A…

Combinatorics · Mathematics 2026-01-29 Eshwar Srinivasan , Ramesh Hariharasubramanian

We introduce a new class of identifiable DAG models where the conditional distribution of each node given its parents belongs to a family of generalized hypergeometric distributions (GHD). A family of generalized hypergeometric…

Machine Learning · Statistics 2019-10-17 Gunwoong Park , Hyewon Park

Graph condensation, which reduces the size of a large-scale graph by synthesizing a small-scale condensed graph as its substitution, has immediate benefits for various graph learning tasks. However, existing graph condensation methods rely…

Machine Learning · Computer Science 2023-10-24 Xin Zheng , Miao Zhang , Chunyang Chen , Quoc Viet Hung Nguyen , Xingquan Zhu , Shirui Pan

A split graph is a graph whose vertex set can be partitioned into a clique and an independent set. A connected graph $G$ is said to be $t$-admissible if admits a special spanning tree in which the distance between any two adjacent vertices…

Combinatorics · Mathematics 2024-06-13 Fernanda Couto , Diego Amaro Ferraz , Sulamita Klein

We propose a new framework for the recognition of online handwritten graphics. Three main features of the framework are its ability to treat symbol and structural level information in an integrated way, its flexibility with respect to…

Computer Vision and Pattern Recognition · Computer Science 2017-09-20 Frank Julca-Aguilar , Harold Mouchère , Christian Viard-Gaudin , Nina S. T. Hirata

Graph Auto-Encoders (GAEs) are powerful tools for graph representation learning. In this paper, we develop a novel Hierarchical Cluster-based GAE (HC-GAE), that can learn effective structural characteristics for graph data analysis. To this…

Machine Learning · Computer Science 2024-05-24 Zhuo Xu , Lu Bai , Lixin Cui , Ming Li , Yue Wang , Edwin R. Hancock

In recent years, hypergraph generalizations of many graph cut problems have been introduced and analyzed as a way to better explore and understand complex systems and datasets characterized by multiway relationships. Recent work has made…

Data Structures and Algorithms · Computer Science 2021-07-05 Austin R. Benson , Jon Kleinberg , Nate Veldt

Given a directed acyclic graph (DAG) $G = (V,E)$, we say that $G$ is $(e,d)$-depth-robust (resp. $(e,d)$-edge-depth-robust) if for any set $S \subset V$ (resp. $S \subseteq E$) of at most $|S| \leq e$ nodes (resp. edges) the graph $G-S$…

Data Structures and Algorithms · Computer Science 2020-12-14 Jeremiah Blocki , Mike Cinkoske

The discovery and analysis of network patterns are central to the scientific enterprise. In the present work, we developed and evaluated a new approach that learns the building blocks of graphs that can be used to understand and generate…

Social and Information Networks · Computer Science 2018-02-26 Salvador Aguinaga , David Chiang , Tim Weninger

An elimination tree for a connected graph $G$ is a rooted tree on the vertices of $G$ obtained by choosing a root $x$ and recursing on the connected components of $G-x$ to produce the subtrees of $x$. Elimination trees appear in many guises…

Discrete Mathematics · Computer Science 2023-09-19 Jean Cardinal , Arturo Merino , Torsten Mütze