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A Hidden Markov Model (HMM) is a common statistical model which is widely used for analysis of biological sequence data and other sequential phenomena. In the present paper we show how HMMs can be extended with side-constraints and present…

Artificial Intelligence · Computer Science 2010-08-02 Henning Christiansen , Christian Theil Have , Ole Torp Lassen , Matthieu Petit

The conformational kinetics of enzymes can be reliably revealed when they are governed by Markovian dynamics. Hidden Markov Models (HMMs) are appropriate especially in the case of conformational states that are hardly distinguishable.…

Quantitative Methods · Quantitative Biology 2009-02-05 A. Kovalev , N. Zarrabi , F. Werz , M. Boersch , Z. Ristic , H. Lill , D. Bald , C. Tietz , J. Wrachtrup

A regularized vector autoregressive hidden semi-Markov model is developed to analyze multivariate financial time series with switching data generating regimes. Furthermore, an augmented EM algorithm is proposed for parameter estimation by…

Applications · Statistics 2021-05-19 Zekun Xu , Ye Liu

Image segmentation is considered to be one of the critical tasks in hyperspectral remote sensing image processing. Recently, convolutional neural network (CNN) has established itself as a powerful model in segmentation and classification by…

Computer Vision and Pattern Recognition · Computer Science 2017-12-29 Fahim Irfan Alam , Jun Zhou , Alan Wee-Chung Liew , Xiuping Jia , Jocelyn Chanussot , Yongsheng Gao

We present a Markov-chain analysis of blockwise-stochastic algorithms for solving partially block-separable optimization problems. Our main contributions to the extensive literature on these methods are statements about the Markov operators…

Optimization and Control · Mathematics 2023-11-01 D. Russell Luke

I consider the use of Markov random fields (MRFs) on a fine grid to represent latent spatial processes when modeling point-level and areal data, including situations with spatial misalignment. Point observations are related to the grid cell…

Methodology · Statistics 2013-04-09 Christopher J. Paciorek

Automatic continuous speech recognition (CSR) is sufficiently mature that a variety of real world applications are now possible including large vocabulary transcription and interactive spoken dialogues. This paper reviews the evolution of…

Machine Learning · Computer Science 2013-01-14 Steve Young

Markov random field (MRF) learning is intractable, and its approximation algorithms are computationally expensive. We target a small subset of MRF that is used frequently in computer vision. We characterize this subset with three concepts:…

Machine Learning · Computer Science 2016-06-09 Rajasekaran Masatran

We introduce the minimal maximally predictive models ({\epsilon}-machines) of processes generated by certain hidden semi-Markov models. Their causal states are either hybrid discrete-continuous or continuous random variables and…

Statistical Mechanics · Physics 2017-05-24 Sarah E. Marzen , James P. Crutchfield

In this project, we first study the Gaussian-based hidden Markov random field (HMRF) model and its expectation-maximization (EM) algorithm. Then we generalize it to Gaussian mixture model-based hidden Markov random field. The algorithm is…

Computer Vision and Pattern Recognition · Computer Science 2012-12-20 Quan Wang

Probabilistic inference in high-dimensional state-space models is computationally challenging. For many spatiotemporal systems, however, prior knowledge about the dependency structure of state variables is available. We leverage this…

Machine Learning · Computer Science 2024-08-09 Fiona Lippert , Bart Kranstauber , E. Emiel van Loon , Patrick Forré

We study the $L_1$-regularized maximum likelihood estimator/estimation (MLE) problem for discrete Markov random fields (MRFs), where efficient and scalable learning requires both sparse regularization and approximate inference. To address…

Machine Learning · Computer Science 2020-05-14 Sinong Geng , Zhaobin Kuang , Jie Liu , Stephen Wright , David Page

We introduce a framework for unsupervised learning of structured predictors with overlapping, global features. Each input's latent representation is predicted conditional on the observable data using a feature-rich conditional random field.…

Machine Learning · Computer Science 2014-11-11 Waleed Ammar , Chris Dyer , Noah A. Smith

Gaussian processes are valuable tools for non-parametric modelling, where typically an assumption of stationarity is employed. While removing this assumption can improve prediction, fitting such models is challenging. In this work,…

Computation · Statistics 2019-05-02 Karla Monterrubio-Gómez , Lassi Roininen , Sara Wade , Theo Damoulas , Mark Girolami

A variety of approaches have been proposed to automatically infer the profiles of users from their digital footprint in social media. Most of the proposed approaches focus on mining a single type of information, while ignoring other sources…

Social and Information Networks · Computer Science 2020-01-07 Golnoosh Farnadi , Lise Getoor , Marie-Francine Moens , Martine De Cock

This paper describes the results of formally evaluating the MCV (Markov concurrent vision) image labeling algorithm which is a (semi-) hierarchical algorithm commencing with a partition made up of single pixel regions and merging regions or…

Computer Vision and Pattern Recognition · Computer Science 2020-08-18 John Mashford , Brad Lane , Vic Ciesielski , Felix Lipkin

We address the problem of analyzing sets of noisy time-varying signals that all report on the same process but confound straightforward analyses due to complex inter-signal heterogeneities and measurement artifacts. In particular we…

In end-to-end automatic speech recognition (ASR), a model is expected to implicitly learn representations suitable for recognizing a word-level sequence. However, the huge abstraction gap between input acoustic signals and output linguistic…

Audio and Speech Processing · Electrical Eng. & Systems 2022-02-09 Yosuke Higuchi , Keita Karube , Tetsuji Ogawa , Tetsunori Kobayashi

We present a framework for the induction of semantic frames from utterances in the context of an adaptive command-and-control interface. The system is trained on an individual user's utterances and the corresponding semantic frames…

Computation and Language · Computer Science 2019-01-31 Janneke van de Loo , Jort F. Gemmeke , Guy De Pauw , Bart Ons , Walter Daelemans , Hugo Van hamme

We present LS-CRF, a new method for very efficient large-scale training of Conditional Random Fields (CRFs). It is inspired by existing closed-form expressions for the maximum likelihood parameters of a generative graphical model with tree…

Machine Learning · Computer Science 2014-03-28 Alexander Kolesnikov , Matthieu Guillaumin , Vittorio Ferrari , Christoph H. Lampert