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We introduce a two-strain model with asymmetric temporary immunity periods and partial cross-immunity. We derive explicit conditions for competitive exclusion and coexistence of the strains depending on the strain-specific basic…

Dynamical Systems · Mathematics 2023-06-28 Matthew D. Johnston , Bruce Pell , David A. Rubel

This paper shows that differentiating the lifetimes of two phenotypes independently from their fertility can lead to a qualitative change in the equilibrium of a population: since survival and reproduction are distinct functional aspects of…

Populations and Evolution · Quantitative Biology 2013-05-22 Ignacio Gallo

Genetic diversity is central to the process of evolution. Both natural selection and random genetic drift are influenced by the level of genetic diversity of a population; selection acts on diversity while drift samples from it. At a given…

Populations and Evolution · Quantitative Biology 2024-11-12 Nikolas Vellnow , Toni I. Gossmann , David Waxman

The need to harmonise apparently irreconcilable arrangements in an ecosystem --nestedness and segregation-- has triggered so far different strategies. Methodological refinements, or the inclusion of behavioural preferences to the network…

Physics and Society · Physics 2018-07-13 Albert Solé-Ribalta , Claudio J. Tessone , Carlo G. Ferrari , Javier Borge-Holthoefer

We consider a population constituted by two types of individuals; each of them can produce offspring in two different islands (as a particular case the islands can be interpreted as active or dormant individuals). We model the evolution of…

Populations and Evolution · Quantitative Biology 2026-04-01 María Emilia Caballero , Adrián González Casanova , José Luis Pérez

We introduce and study a natural multispecies variant of the inhomogeneous PushTASEP with site-dependent rates on the finite ring. We show that the stationary distribution of this process is proportional to the ASEP polynomials at $q = 1$…

Probability · Mathematics 2024-09-04 Arvind Ayyer , James B. Martin

We model and study the genetic evolution and conservation of a population of diploid hermaphroditic organisms, evolving continuously in time and subject to resource competition. In the absence of mutations, the population follows a 3-type…

Probability · Mathematics 2012-07-23 Camille Coron

When long-lived, balancing selection can lead to trans-species polymorphisms that are shared by two or more species identical by descent. In this case, the gene genealogies at the selected sites cluster by allele instead of by species and,…

Populations and Evolution · Quantitative Biology 2014-01-30 Ziyue Gao , Molly Przeworski , Guy Sella

The aim of this paper is to describe a population model with transition. We analyze the spectral properties of the transition matrix considering both irreducible and reducible structures. We give physical interpretations of these properties…

Analysis of PDEs · Mathematics 2024-09-30 Amartya Goswami

A steady influx of a single deleterious multilocus genotype will impose genetic load on the resident population and leave multiple descendants carrying various numbers of the foreign alleles. Provided that the foreign types are rare at…

Populations and Evolution · Quantitative Biology 2015-06-16 Alexey Yanchukov , Stephen R. Proulx

Source-sink systems are metapopulations of patches that can be of variable habitat quality. They can be seen as graphs, where vertices represent the patches, and the weighted oriented edges give the probability of dispersal from one patch…

Probability · Mathematics 2011-11-11 Vincent Bansaye , Amaury Lambert

Consider a haploid population of fixed finite size with a finite number of allele types and having Cannings exchangeable genealogy with neutral mutation. The stationary distribution of the Markov chain of allele counts in each generation is…

Probability · Mathematics 2016-12-09 H. L. Gan , Adrian Röllin , Nathan Ross

We propose a class of evolutionary models that involves an arbitrary exchangeable process as the breeding process and different selection schemes. In those models, a new genome is born according to the breeding process, and then a genome is…

Neural and Evolutionary Computing · Computer Science 2020-08-25 Jüri Lember , Chris Watkins

There is a rich literature for modeling binary and polychotomous responses. However, existing methods are inadequate for handling combinatorial responses, where each response is an integer array under additional constraints. Such data are…

Methodology · Statistics 2026-05-05 Yu Zheng , Malay Ghosh , Leo Duan

A mechanism of sympatric speciation is presented based on the interaction-induced developmental plasticity of phenotypes. First, phenotypes of individuals with identical genotypes split into a few groups, according to instability in the…

Adaptation and Self-Organizing Systems · Physics 2007-05-23 Kunihiko Kaneko

Let L be any infinite biperiodic alternating link. We show that for any sequence of finite links that Folner converges almost everywhere to L, their determinant densities converge to the Mahler measure of the 2-variable characteristic…

Geometric Topology · Mathematics 2018-11-16 Abhijit Champanerkar , Ilya Kofman

We propose a change in focus from the prevalent paradigm based on the branching property as a tool to analyze the structure of population models, to one based on the self-similarity property, which we also introduce for the first time in…

Probability · Mathematics 2026-04-15 Arno Siri-Jégousse , Alejandro Hernández Wences

Social discrimination seems to be a persistent phenomenon in many cultures. It is important to understand the mechanisms that lead people to judge others by the group to which they belong, rather than individual qualities. It was recently…

Adaptation and Self-Organizing Systems · Physics 2019-12-11 Gorm Gruner Jensen , Frederik Tischel , Stefan Bornholdt

Thuiller et al. analyzed the consequences of anticipated climate change on plant, bird, and mammal phylogenetic diversity (PD) across Europe. They concluded that species loss will not be clade specific across the Tree of Life, and that…

Populations and Evolution · Quantitative Biology 2014-06-23 Charles C. Davis , Hanno Schaefer , Brad R. Ruhfel , Michael J. Donoghue , Erika J. Edwards

Development combines three basic processes asymmetric --- cell division, signaling and gene regulation --- in a multitude of ways to create an overwhelming diversity of multicellular life-forms. Here, we attempt to chart this diversity…

Molecular Networks · Quantitative Biology 2020-01-01 Somya Mani , Tsvi Tlusty