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Constraining the many biological parameters that govern cortical dynamics is computationally and conceptually difficult because of the curse of dimensionality. This paper addresses these challenges by proposing (1) a novel data-informed…

Neurons and Cognition · Quantitative Biology 2021-12-30 Zhuo-Cheng Xiao , Kevin K. Lin , Lai-Sang Young

The neuromagnetic activity (magnetoencephalogram, MEG) from healthy human brain and from an epileptic patient against chromatic flickering stimuli has been earlier analyzed on the basis of a memory functions formalism (MFF). Information…

Medical Physics · Physics 2010-06-29 O. Yu. Panischev , S. A. Demin , J. Bhattacharya

Electrical stimulation of neural systems is a key tool for understanding neural dynamics and ultimately for developing clinical treatments. Many applications of electrical stimulation affect large populations of neurons. However,…

Neurons and Cognition · Quantitative Biology 2020-11-18 Caglar Cakan , Klaus Obermayer

The inherent complexity of biological systems gives rise to complicated mechanistic models with a large number of parameters. On the other hand, the collective behavior of these systems can often be characterized by a relatively small…

Quantitative Methods · Quantitative Biology 2016-06-15 Mark K. Transtrum , Peng Qiu

Neural mass models are used to simulate cortical dynamics and to explain the electrical and magnetic fields measured using electro- and magnetoencephalography. Simulations evince a complex phase-space structure for these kinds of models;…

Neurons and Cognition · Quantitative Biology 2022-08-25 Gerald Cooray , Richard Rosch , Karl Friston

Modeling and parameter estimation for neuronal dynamics are often challenging because many parameters can range over orders of magnitude and are difficult to measure experimentally. Moreover, selecting a suitable model complexity requires a…

Dynamical Systems · Mathematics 2018-01-31 J. E. Rubin , B. Krauskopf , H. M. Osinga

Mean-field theory is a powerful tool for studying large neural networks. However, when the system is composed of a few neurons, macroscopic differences between the mean-field approximation and the real behavior of the network can arise.…

Neurons and Cognition · Quantitative Biology 2016-09-28 Diego Fasoli , Anna Cattani , Stefano Panzeri

Brain foundation models (BFMs) have emerged as a transformative paradigm in computational neuroscience, offering a revolutionary framework for processing diverse neural signals across different brain-related tasks. These models leverage…

Machine Learning · Computer Science 2025-07-22 Xinliang Zhou , Chenyu Liu , Zhisheng Chen , Kun Wang , Yi Ding , Ziyu Jia , Qingsong Wen

Animals must constantly make decisions on the move, such as when choosing among multiple options, or "targets", in space. Recent evidence suggests that this results from a recursive feedback between the (vectorial) neural representation of…

Neurons and Cognition · Quantitative Biology 2025-05-02 Dan Gorbonos , Nir S. Gov , Iain D. Couzin

Adaptive behavior, cognition and emotion are the result of a bewildering variety of brain spatiotemporal activity patterns. An important problem in neuroscience is to understand the mechanism by which the human brain's 100 billion neurons…

Neurons and Cognition · Quantitative Biology 2011-05-09 Paul Expert , Renaud Lambiotte , Dante R. Chialvo , Kim Christensen , Henrik Jeldtoft Jensen , David J. Sharp , Federico Turkheimer

Background: Brain network models offer insights into brain dynamics, but the utility of model-derived bifurcation parameters as biomarkers remains underexplored. Objective: This study evaluates bifurcation parameters from a whole-brain…

Neurons and Cognition · Quantitative Biology 2025-11-26 Facundo Roffet , Gustavo Deco , Claudio Delrieux , Gustavo Patow

Human brains exhibit highly organized multiscale neurophysiological dynamics. Understanding those dynamic changes and the neuronal networks involved is critical for understanding how the brain functions in health and disease. Functional…

Neurons and Cognition · Quantitative Biology 2024-09-09 Manuel Morante , Kristian Frølich , Naveed ur Rehman

Differential equation-based physiological models of sleep-wake networks describe sleep-wake regulation by simulating the activity of wake- and sleep-promoting neuronal populations and the modulation of these populations by homeostatic and…

Dynamical Systems · Mathematics 2021-11-16 Christina Athanasouli , Sofia H. Piltz , Cecilia Diniz Behn , Victoria Booth

A central challenge in the computational modeling of neural dynamics is the trade-off between accuracy and simplicity. At the level of individual neurons, nonlinear dynamics are both experimentally established and essential for neuronal…

Mean-field systems have been recently derived that adequately predict the behaviors of large networks of coupled integrate-and-fire neurons [14]. The mean-field system for a network of neurons with spike frequency adaptation is typically a…

Dynamical Systems · Mathematics 2014-08-21 Wilten Nicola , Sue Ann Campbell

Neuromorphic computing targets energy-efficient event-driven information processing by placing artificial spiking-neurons at its core. Artificial neuron devices and circuits have multiple operating modes and produce region-dependent…

Applied Physics · Physics 2026-01-06 Zhiwei Li , Shi-Li Zhang , Chenyu Wen

Bifurcation analysis collects techniques for characterizing the dependence of certain classes of solutions of a dynamical system on variations in problem parameters. Common solution classes of interest include equilibria and periodic…

Dynamical Systems · Mathematics 2025-11-05 Harry Dankowicz , Jan Sieber

We analytically derive mean-field models for all-to-all coupled networks of heterogeneous, adapting, two-dimensional integrate and fire neurons. The class of models we consider includes the Izhikevich, adaptive exponential, and quartic…

Neurons and Cognition · Quantitative Biology 2013-09-20 Wilten Nicola , Sue Ann Campbell

Elucidating the intricate relationship between brain structure and function, both in healthy and pathological conditions, is a key challenge for modern neuroscience. Recent technical and methodological progress in neuroimaging has helped…

Neurons and Cognition · Quantitative Biology 2015-05-01 Ibai Diez , Paolo Bonifazi , Iñaki Escudero , Beatriz Mateos , Miguel A. Muñoz , Sebastiano Stramaglia , Jesus M. Cortes

Modelling the dynamics of interactions in a neuronal ensemble is an important problem in functional connectivity research. One popular framework is latent factor models (LFMs), which have achieved notable success in decoding neuronal…

Methodology · Statistics 2023-05-18 Meixi Chen , Martin Lysy , David Moorman , Reza Ramezan
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