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Solving inverse problems and achieving statistical rigour in landscape evolution models requires running many model realizations. Parallel computation is necessary to achieve this in a reasonable time. However, no previous algorithm is…

Computational Engineering, Finance, and Science · Computer Science 2019-01-23 Richard Barnes

We present a parallel version of the cut-pursuit algorithm for minimizing functionals involving the graph total variation. We show that the decomposition of the iterate into constant connected components, which is at the center of this…

Data Structures and Algorithms · Computer Science 2019-05-08 Hugo Raguet , Loic Landrieu

Although some preconditioners are available for solving dense linear systems, there are still many matrices for which preconditioners are lacking, in particular in cases where the size of the matrix $N$ becomes very large. There remains…

Numerical Analysis · Mathematics 2016-02-05 Pieter Coulier , Hadi Pouransari , Eric Darve

SCAN (Structural Clustering Algorithm for Networks) is a well-studied, widely used graph clustering algorithm. For large graphs, however, sequential SCAN variants are prohibitively slow, and parallel SCAN variants do not effectively share…

Databases · Computer Science 2021-04-01 Tom Tseng , Laxman Dhulipala , Julian Shun

To design efficient parallel algorithms, some recent papers showed that many sequential iterative algorithms can be directly parallelized but there are still challenges in achieving work-efficiency and high-parallelism. Work-efficiency can…

Data Structures and Algorithms · Computer Science 2022-05-27 Zheqi Shen , Zijin Wan , Yan Gu , Yihan Sun

The problem of Bayesian filtering and smoothing in nonlinear models with additive noise is an active area of research. Classical Taylor series as well as more recent sigma-point based methods are two well-known strategies to deal with these…

Distributed, Parallel, and Cluster Computing · Computer Science 2021-02-02 Fatemeh Yaghoobi , Adrien Corenflos , Sakira Hassan , Simo Särkkä

The main objective of this work consists in analyzing sub-structuring method for the parallel solution of sparse linear systems with matrices arising from the discretization of partial differential equations such as finite element, finite…

Numerical Analysis · Mathematics 2021-08-31 Abal-Kassim Cheik Ahamed , Frédéric Magoulès

The aim of the paper is to introduce general techniques in order to optimize the parallel execution time of sorting on a distributed architectures with processors of various speeds. Such an application requires a partitioning step. For…

Distributed, Parallel, and Cluster Computing · Computer Science 2016-08-16 Christophe Cérin , Jean-Christophe Dubacq , Jean-Louis Roch , the SafeScale Collaboration

We consider the use of multipreconditioning, which allows for multiple preconditioners to be applied in parallel, on high-frequency Helmholtz problems. Typical applications present challenging sparse linear systems which are complex…

Numerical Analysis · Mathematics 2025-05-19 Niall Bootland , Tyrone Rees

This paper initiates the studies of parallel algorithms for core maintenance in dynamic graphs. The core number is a fundamental index reflecting the cohesiveness of a graph, which are widely used in large-scale graph analytics. The core…

Data Structures and Algorithms · Computer Science 2017-01-02 Na Wang , Dongxiao Yu , Hai Jin , Chen Qian , Xia Xie , Qiang-Sheng Hua

We describe a parallel solver for the discretized weakly singular space-time boundary integral equation of the spatially two-dimensional heat equation. The global space-time nature of the system matrices leads to improved parallel…

Numerical Analysis · Mathematics 2021-02-23 Stefan Dohr , Michal Merta , Günther Of , Olaf Steinbach , Jan Zapletal

The computational kernel in solving the $S_N$ transport equations is the parallel sweep, which corresponds to directly inverting a block lower triangular linear system that arises in discretizations of the linear transport equation.…

Computational Physics · Physics 2019-10-28 Joshua Hanophy , Ben S. Southworth , Ruipeng Li , Jim Morel , Tom Manteuffel

We study the problem of executing an application represented by a precedence task graph on a parallel machine composed of standard computing cores and accelerators. Contrary to most existing approaches, we distinguish the allocation and the…

Distributed, Parallel, and Cluster Computing · Computer Science 2017-11-20 Marcos Amaris , Giorgio Lucarelli , Clément Mommessin , Denis Trystram

This paper presents algorithms for temporal parallelization of Bayesian smoothers. We define the elements and the operators to pose these problems as the solutions to all-prefix-sums operations for which efficient parallel scan-algorithms…

Computation · Statistics 2020-02-21 Simo Särkkä , Ángel F. García-Fernández

We introduce a parallel algorithm to construct a preconditioner for solving a large, sparse linear system where the coefficient matrix is a Laplacian matrix (a.k.a., graph Laplacian). Such a linear system arises from applications such as…

Distributed, Parallel, and Cluster Computing · Computer Science 2025-05-30 Tianyu Liang , Chao Chen , Yotam Yaniv , Hengrui Luo , David Tench , Xiaoye S. Li , Aydin Buluc , James Demmel

We study preconditioned gradient-based optimization methods where the preconditioning matrix has block-diagonal form. Such a structural constraint comes with the advantage that the update computation is block-separable and can be…

Machine Learning · Computer Science 2020-12-08 Celestine Mendler-Dünner , Aurelien Lucchi

Fast, scalable decoding architectures that operate in a block-wise parallel fashion across space and time are essential for real-time fault-tolerant quantum computing. We introduce a scalable AI-based pre-decoder for the surface code that…

Quantum Physics · Physics 2026-04-15 Christopher Chamberland , Jan Olle , Muyuan Li , Scott Thornton , Igor Baratta

Supercomputers are equipped with an increasingly large number of cores to use computational power as a way of solving problems that are otherwise intractable. Unfortunately, getting serial algorithms to run in parallel to take advantage of…

Distributed, Parallel, and Cluster Computing · Computer Science 2013-12-31 Faisal N. Abu-Khzam , Khuzaima Daudjee , Amer E. Mouawad , Naomi Nishimura

We proposed a parallel-in-time method based on preconditioner for Biot's consolidation model in poroelasticity. In order to achieve a fast and stable convergence for the matrix system of the Biot's model, we design two preconditioners with…

Numerical Analysis · Mathematics 2023-10-17 Zeyuan Zhou , Huipeng Gu , Guoliang Ju , Wei Xing

Sorting is one of the most fundamental problems in the field of computer science. With the rapid development of manycore processors, it shows great importance to design efficient parallel sort algorithm on manycore architecture. This paper…

Distributed, Parallel, and Cluster Computing · Computer Science 2022-02-18 Tianyi Yu , Wei Li