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An thorough introduction is given at an introductory level to the field of quantitative complex system science, with special emphasis on emergence in dynamical systems based on network topologies. Subjects treated include graph theory and…

Adaptation and Self-Organizing Systems · Physics 2017-11-23 C. Gros

Mathematical modelling allows us to concisely describe fundamental principles in biology. Analysis of models can help to both explain known phenomena, and predict the existence of new, unseen behaviours. Model analysis is often a complex…

Quantitative Methods · Quantitative Biology 2020-08-13 Mark Blyth , Ludovic Renson , Lucia Marucci

We introduce and analyze the problem of the compilation of decision models from a decision-theoretic perspective. The techniques described allow us to evaluate various configurations of compiled knowledge given the nature of evidential…

Artificial Intelligence · Computer Science 2013-04-08 David Heckerman , John S. Breese , Eric J. Horvitz

A categorical framework for modeling and analyzing systems in a broad sense is proposed. These systems should be thought of as `machines' with inputs and outputs, carrying some sort of signal that occurs through some notion of time. Special…

Category Theory · Mathematics 2019-03-18 Patrick Schultz , David I. Spivak , Christina Vasilakopoulou

Signal processing traditionally relies on classical statistical modeling techniques. Such model-based methods utilize mathematical formulations that represent the underlying physics, prior information and additional domain knowledge. Simple…

Signal Processing · Electrical Eng. & Systems 2023-06-08 Nir Shlezinger , Yonina C. Eldar

Cosmology is a well established research area in physics while dynamical systems are well established in mathematics. It turns out that dynamical system techniques are very well suited to study many aspects of cosmology. The aim of this…

General Relativity and Quantum Cosmology · Physics 2018-06-25 Christian G. Boehmer , Nyein Chan

Many automated system analysis techniques (e.g., model checking, model-based testing) rely on first obtaining a model of the system under analysis. System modeling is often done manually, which is often considered as a hindrance to adopt…

Software Engineering · Computer Science 2019-11-22 Jingyi Wang , Jun Sun , Qixia Yuan , Jun Pang

Deep model-based reinforcement learning methods offer a conceptually simple approach to the decision-making and control problem: use learning for the purpose of estimating an approximate dynamics model, and offload the rest of the work to…

Machine Learning · Computer Science 2023-07-13 Michael Janner

The article describes a course on system design (structural approach) which involves the following: issues of systems engineering; structural models; basic technological problems (structural system modeling, modular design,…

Software Engineering · Computer Science 2015-03-19 Mark Sh. Levin

This paper proposes a systems approach to social sciences based on mathematical framework derived from a generalization of the mathematical kinetic theory and on theoretical tools of game theory. Social systems are modeled as a living…

Physics and Society · Physics 2015-09-14 Giulia Ajmone Marsan , Nicola Bellomo , Livio Gibelli

The rise of AI in human contexts places new demands on automated systems to be transparent and explainable. We examine some anthropomorphic ideas and principles relevant to such accountablity in order to develop a theoretical framework for…

Artificial Intelligence · Computer Science 2024-01-18 Edwin J. Beggs , John V. Tucker

Dynamical systems theory describes how interacting quantities change over time and space, from molecular oscillators to large-scale biological patterns. Such systems often involve nonlinear feedbacks, delays, and interactions across scales.…

Quantitative Methods · Quantitative Biology 2025-09-09 Bartosz Prokop , Lendert Gelens

Time-discrete dynamical systems on a finite state space have been used with great success to model natural and engineered systems such as biological networks, social networks, and engineered control systems. They have the advantage of being…

Combinatorics · Mathematics 2015-03-17 Alan Veliz-Cuba , Reinhard Laubenbacher

Modern communication networks are inherently complex in nature. First of all, they have a large number of heterogeneous components. Secondly, their connectivity is extremely dynamic. Nodes can come and go, links can be removed and added…

Social and Information Networks · Computer Science 2017-08-08 Bisma S. Khan , Muaz A. Niazi

Many cellular processes involve information processing and decision making. We can probe these processes at increasing molecular detail. The analysis of heterogeneous data remains a challenge that requires new ways of thinking about cells…

Cell Behavior · Quantitative Biology 2024-12-03 Lucy Ham , Taylor E. Woodford , Megan A. Coomer , Michael P. H. Stumpf

Model-based methods are the dominant paradigm for controlling robotic systems, though their efficacy depends heavily on the accuracy of the model used. Deep neural networks have been used to learn models of robot dynamics from data, but…

Robotics · Computer Science 2020-04-23 Jayesh K. Gupta , Kunal Menda , Zachary Manchester , Mykel J. Kochenderfer

Control schemes for dynamical systems typically involve stabilizing unstable periodic orbits. In this paper we introduce a new paradigm of control that involves `trapping' the dynamics arbitrarily close to any desired trajectory. This is…

Chaotic Dynamics · Physics 2015-12-08 Shakti N. Menon , S. Sridhar , Sitabhra Sinha

Systems engineering has developed a mature knowledge on how to design, integrate and manage complex industrial systems, whereas disciplines studying complex systems in nature or society also propose numerous tools for their understanding.…

Computers and Society · Computer Science 2018-05-28 Juste Raimbault

We advocate the use of qualitative models in the analysis of large biological systems. We show how qualitative models are linked to theoretical differential models and practical graphical models of biological networks. A new technique for…

Molecular Networks · Quantitative Biology 2007-05-23 Philippe Veber , Michel Le_Borgne , Anne Siegel , Sandrine Lagarrigue , Ovidiu Radulescu

There is a lack of formalism for some key foundational concepts in systems engineering. One of the most recently acknowledged deficits is the inadequacy of systems engineering practices for engineering intelligent systems. In our previous…

Artificial Intelligence · Computer Science 2024-09-21 Niloofar Shadab , Tyler Cody , Alejandro Salado , Peter Beling
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