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Related papers: Phylogenetic Proximity and Nestedness in Mutualist…

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Mutualistic interactions are widespread in nature, from plant communities and microbiomes to human organizations. Along with competition for resources, cooperative interactions shape biodiversity and contribute to the robustness of complex…

Populations and Evolution · Quantitative Biology 2025-12-24 Jordi Piñero , Artemy Kolchinsky , Sidney Redner , Ricard Solé

This study investigates the prevalence and implications of nestedness within primate social networks, examining its relationship with cognitive and structural factors. We analysed data from 51 primate groups across 21 species, employing…

What determines biodiversity in nature is a prominent issue in ecology, especially in biotic resource systems that are typically devoid of cross-feeding. Here, we show that by incorporating pairwise encounters among consumer individuals…

Populations and Evolution · Quantitative Biology 2025-06-18 Ju Kang , Shijie Zhang , Yiyuan Niu , Xin Wang

The far-reaching consequences of ecological interactions in the dynamics of biological communities remain an intriguing subject. For decades, competition has been a cornerstone in ecological processes, but mounting evidence shows that…

Populations and Evolution · Quantitative Biology 2021-07-19 F. Meloni , G. Nakamura , B. Grammaticos , A. S. Martinez , M. Badoual

We present new theoretical and empirical results on the probability distributions of species persistence times in natural ecosystems. Persistence times, defined as the timespans occurring between species' colonization and local extinction…

Populations and Evolution · Quantitative Biology 2012-03-21 S. Suweis , E. Bertuzzo , L. Mari , I. Rodriguez-Iturbe , A. Maritan , A. Rinaldo

Mutualisms are key for structuring ecological communities, but they are sensitive to environmental change and fluctuations in population size. Consequently, how mutualisms achieve stability remains an open question in ecological theory.…

Populations and Evolution · Quantitative Biology 2026-05-08 Matheus Bongestab , David Pinto-Ramos , Ricardo Martinez-Garcia

A central concern of community ecology is the interdependence between interaction strengths and the underlying structure of the network upon which species interact. In this work we present a solvable example of such a feedback mechanism in…

Populations and Evolution · Quantitative Biology 2024-04-15 Lyle Poley , Tobias Galla , Joseph W. Baron

Mutualistic interactions are vital constituents of ecological and socio-economic systems. Empirical studies have found that the patterns of reciprocal relations among the participants often shows the salient features of being simultaneously…

Populations and Evolution · Quantitative Biology 2018-12-17 Weiran Cai , Jordan Snyder , Alan Hastings , Raissa M. D'Souza

The aim of this review is to present and analyze the probabilistic models of mathematical phylogenetics which have been intensively used in recent years in biology as the cornerstone of attempts to infer and reconstruct the ancestral…

Populations and Evolution · Quantitative Biology 2020-01-08 Peter D Jarvis , Jeremy G Sumner

We study the statistics of ecosystems with a variable number of co-evolving species. The species interact in two ways: by prey-predator relationships and by direct competition with similar kinds. The interaction coefficients change slowly…

Adaptation and Self-Organizing Systems · Physics 2015-06-26 Michael Lassig , Ugo Bastolla , Susanna C. Manrubia , Angelo Valleriani

Modern biological tools have made it possible to unequivocally demonstrate the deep relationship among species in terms of genes and basic molecular mechanisms. In addition, results from genetic, physical and physiological approaches…

Populations and Evolution · Quantitative Biology 2019-03-11 Jacques H. Daniel

We are interested in modeling some two-level population dynamics, resulting from the interplay of ecological interactions and phenotypic variation of individuals (or hosts) and the evolution of cells (or parasites) of two types living in…

Probability · Mathematics 2011-01-21 Sylvie Méléard , Sylvie Roelly

In a complex system, the individual components are neither so tightly coupled or correlated that they can all be treated as a single unit, nor so uncorrelated that they can be approximated as independent entities. Instead, patterns of…

Populations and Evolution · Quantitative Biology 2015-09-15 Blake C. Stacey

Despite the common misconception of nearly static organisms, plants do interact continuously with the environment and with each other. It is fair to assume that during their evolution they developed particular features to overcome problems…

Populations and Evolution · Quantitative Biology 2016-02-19 Gianna Vivaldo , Elisa Masi , Camilla Pandolfi , Stefano Mancuso , Guido Caldarelli

The Tangled Nature Model of biological and cultural evolution features interacting agents which compete for limited resources and reproduce in an error prone fashion and at a rate depending on the `tangle' of interactions they maintain with…

Populations and Evolution · Quantitative Biology 2016-05-25 Christian Walther Andersen , Paolo Sibani

We consider the concept of mutual information in ecological networks, and use this idea to analyse the Tangled Nature model of co-evolution. We show that this measure of correlation has two distinct behaviours depending on how we define the…

Populations and Evolution · Quantitative Biology 2009-11-02 Dominic Jones , Henrik Jeldtoft Jensen , Paolo Sibani

The need to harmonise apparently irreconcilable arrangements in an ecosystem --nestedness and segregation-- has triggered so far different strategies. Methodological refinements, or the inclusion of behavioural preferences to the network…

Physics and Society · Physics 2018-07-13 Albert Solé-Ribalta , Claudio J. Tessone , Carlo G. Ferrari , Javier Borge-Holthoefer

One of the central questions of metacommunity theory is how dispersal of organisms affects species diversity. Here we show that the diversity-dispersal relationship should not be studied in isolation of other abiotic and biotic flows in the…

Populations and Evolution · Quantitative Biology 2014-02-12 Bart Haegeman , Michel Loreau

We introduce a mathematical model of symbiosis between different species by taking into account the influence of each species on the carrying capacities of the others. The modeled entities can pertain to biological and ecological societies…

Biological Physics · Physics 2012-06-06 V. I. Yukalov , E. P. Yukalova , D. Sornette

This is the second of two papers dedicated to the relationship between population models of competition and biodiversity. Here we consider species assembly models where the population dynamics is kept far from fixed points through the…

Populations and Evolution · Quantitative Biology 2007-05-23 Ugo Bastolla , Michael Lässig , Susanna C. Manrubia , Angelo Valleriani
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