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We introduce a new family of compressed data structures to efficiently store and query large string dictionaries in main memory. Our main technique is a combination of hierarchical Front-coding with ideas from longest-common-prefix…

Data Structures and Algorithms · Computer Science 2019-11-20 Nieves R. Brisaboa , Ana Cerdeira-Pena , Guillermo de Bernardo , Gonzalo Navarro

We study low rank approximation of tensors, focusing on the tensor train and Tucker decompositions, as well as approximations with tree tensor networks and more general tensor networks. For tensor train decomposition, we give a bicriteria…

Data Structures and Algorithms · Computer Science 2023-11-28 Arvind V. Mahankali , David P. Woodruff , Ziyu Zhang

We present a new universal source code for distributions of unlabeled binary and ordinal trees that achieves optimal compression to within lower order terms for all tree sources covered by existing universal codes. At the same time, it…

Data Structures and Algorithms · Computer Science 2021-09-06 J. Ian Munro , Patrick K. Nicholson , Louisa Seelbach Benkner , Sebastian Wild

Tensors are a natural way to express correlations among many physical variables, but storing tensors in a computer naively requires memory which scales exponentially in the rank of the tensor. This is not optimal, as the required memory is…

Computational Physics · Physics 2018-12-03 Adam S. Jermyn

Large-alphabet strings are common in scenarios such as information retrieval and natural-language processing. The efficient storage and processing of such strings usually introduces several challenges that are not witnessed in…

Data Structures and Algorithms · Computer Science 2024-05-03 Diego Arroyuelo , Gabriel Carmona , Héctor Larrañaga , Francisco Riveros , Carlos Eugenio Rojas-Morales , Erick Sepúlveda

The class of self-nested trees presents remarkable compression properties because of the systematic repetition of subtrees in their structure. In this paper, we provide a better combinatorial characterization of this specific family of…

Data Structures and Algorithms · Computer Science 2018-10-26 Romain Azaïs , Jean-Baptiste Durand , Christophe Godin

This paper studies the important problem of finding all $k$-nearest neighbors to points of a query set $Q$ in another reference set $R$ within any metric space. Our previous work defined compressed cover trees and corrected the key…

Computational Geometry · Computer Science 2022-01-21 Yury Elkin , Vitaliy Kurlin

Machine learning on trees has been mostly focused on trees as input to algorithms. Much less research has investigated trees as output, which has many applications, such as molecule optimization for drug discovery, or hint generation for…

Machine Learning · Computer Science 2022-02-11 Benjamin Paassen , Irena Koprinska , Kalina Yacef

We use reinforcement learning to learn tree-structured neural networks for computing representations of natural language sentences. In contrast with prior work on tree-structured models in which the trees are either provided as input or…

Computation and Language · Computer Science 2016-11-29 Dani Yogatama , Phil Blunsom , Chris Dyer , Edward Grefenstette , Wang Ling

In this paper we present novel algorithmic techniques with a O(H(N)+N/H(N)) time complexity for performing several types of queries and updates on general rooted trees, binary search trees and lists of size N. For rooted trees we introduce…

Data Structures and Algorithms · Computer Science 2013-03-25 Mugurel Ionut Andreica

Ensemble methods are among the state-of-the-art predictive modeling approaches. Applied to modern big data, these methods often require a large number of sub-learners, where the complexity of each learner typically grows with the size of…

Machine Learning · Computer Science 2018-10-29 Amichai Painsky , Saharon Rosset

In this paper we propose and study a new complexity model for approximation algorithms. The main motivation are practical problems over large data sets that need to be solved many times for different scenarios, e.g., many multicast trees…

Data Structures and Algorithms · Computer Science 2010-06-18 Marek Cygan , Lukasz Kowalik , Marcin Mucha , Marcin Pilipczuk , Piotr Sankowski

Despite their high accuracy, complex neural networks demand significant computational resources, posing challenges for deployment on resource constrained devices such as mobile phones and embedded systems. Compression algorithms have been…

Machine Learning · Computer Science 2025-09-23 Ali Aghababaei-Harandi , Massih-Reza Amini

Given a string $S$ of length $n$, the classic string indexing problem is to preprocess $S$ into a compact data structure that supports efficient subsequent pattern queries. In this paper we consider the basic variant where the pattern is…

Data Structures and Algorithms · Computer Science 2024-02-15 Philip Bille , Inge Li Gørtz , Teresa Anna Steiner

We present a novel parsing algorithm for all context-free languages, based on computing the relation between configurations and reaching transitions in a recursive transition network. Parsing complexity w.r.t. input length matches the state…

Formal Languages and Automata Theory · Computer Science 2019-02-19 Grzegorz Herman

Much research has been devoted to optimizing algorithms of the Lempel-Ziv (LZ) 77 family, both in terms of speed and memory requirements. Binary search trees and suffix trees (ST) are data structures that have been often used for this…

Data Structures and Algorithms · Computer Science 2016-11-17 Artur Ferreira , Arlindo Oliveira , Mario Figueiredo

The kernel method is a potential approach to analyzing structured data such as sequences, trees, and graphs; however, unordered trees have not been investigated extensively. Kimura et al. (2011) proposed a kernel function for unordered…

Data Structures and Algorithms · Computer Science 2012-06-22 Daisuke Kimura , Hisashi Kashima

Given a set of pattern strings $\mathcal{P}=\{P_1, P_2,\ldots P_k\}$ and a text string $S$, the classic dictionary matching problem is to report all occurrences of each pattern in $S$. We study the dictionary problem in the compressed…

Data Structures and Algorithms · Computer Science 2025-09-04 Philip Bille , Inge Li Gørtz , Simon J. Puglisi , Simon R. Tarnow

In tree based adaptive mesh refinement, elements are partitioned between processes using a space filling curve. The curve establishes an ordering between all elements that derive from the same root element, the tree. When representing more…

Distributed, Parallel, and Cluster Computing · Computer Science 2016-11-10 Carsten Burstedde , Johannes Holke

Constrained counting is a fundamental problem in artificial intelligence. A promising new algebraic approach to constrained counting makes use of tensor networks, following a reduction from constrained counting to the problem of…

Data Structures and Algorithms · Computer Science 2020-04-29 Jeffrey M. Dudek , Leonardo Dueñas-Osorio , Moshe Y. Vardi