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A key goal of systems biology is the predictive mathematical description of gene regulatory circuits. Different approaches are used such as deterministic and stochastic models, models that describe cell growth and division explicitly or…

Molecular Networks · Quantitative Biology 2012-10-12 Rahul Marathe , Veronika Bierbaum , David Gomez , Stefan Klumpp

The availability of large labeled datasets has allowed Convolutional Network models to achieve impressive recognition results. However, in many settings manual annotation of the data is impractical; instead our data has noisy labels, i.e.…

Computer Vision and Pattern Recognition · Computer Science 2015-04-13 Sainbayar Sukhbaatar , Joan Bruna , Manohar Paluri , Lubomir Bourdev , Rob Fergus

We consider the problem of determining the power ratio between the training symbols and data symbols in order to maximize the channel capacity for transmission over uncertain channels with a channel estimate available at both the…

Information Theory · Computer Science 2015-05-13 Ather Gattami

This paper focuses on a particular transmission scheme called local network coding, which has been reported to provide significant performance gains in practical wireless networks. The performance of this scheme strongly depends on the…

Networking and Internet Architecture · Computer Science 2015-03-17 Petteri Mannersalo , Georgios S. Paschos , Lazaros Gkatzikis

The problem of stabilizing an unstable plant over a noisy communication link is an increasingly important one that arises in applications of networked control systems. Although the work of Schulman and Sahai over the past two decades, and…

Information Theory · Computer Science 2012-02-28 Ravi Teja Sukhavasi , Babak Hassibi

We consider signal transaction in a simple neuronal model featuring intrinsic noise. The presence of noise limits the precision of neural responses and impacts the quality of neural signal transduction. We assess the signal transduction…

Biological Physics · Physics 2015-03-17 Michael J. Barber , Manfred L. Ristig

We study coding schemes for error correction in interactive communications. Such interactive coding schemes simulate any $n$-round interactive protocol using $N$ rounds over an adversarial channel that corrupts up to $\rho N$ transmissions.…

Data Structures and Algorithms · Computer Science 2014-04-17 Mohsen Ghaffari , Bernhard Haeupler

In this paper we optimize constellation sets to be used for channels affected by phase noise. The main objective is to maximize the achievable mutual information of the constellation under a given power constraint. The mutual information…

Information Theory · Computer Science 2012-10-08 Farbod Kayhan , Guido Montorsi

The adaptation of neural codes to the statistics of their environment is well captured by efficient coding approaches. Here we solve an inverse problem: characterizing the objective and constraint functions that efficient codes appear to be…

Neurons and Cognition · Quantitative Biology 2021-02-25 Luke Rast , Jan Drugowitsch

Quantum machine learning models have the potential to offer speedups and better predictive accuracy compared to their classical counterparts. However, these quantum algorithms, like their classical counterparts, have been shown to also be…

Quantum Physics · Physics 2021-05-27 Maurice Weber , Nana Liu , Bo Li , Ce Zhang , Zhikuan Zhao

Quantum error correcting codes have been shown to have the ability of making quantum information resilient against noise. Here we show that we can use quantum error correcting codes as diagnostics to characterise noise. The experiment is…

Quantum Physics · Physics 2009-11-13 M. Laforest , D. Simon , J. -C. Boileau , J. Baugh , M. Ditty , R. Laflamme

Quantum error correction allows to actively correct errors occurring in a quantum computation when the noise is weak enough. To make this error correction competitive information about the specific noise is required. Traditionally, this…

Quantum Physics · Physics 2021-04-07 Thomas Wagner , Hermann Kampermann , Dagmar Bruß , Martin Kliesch

Biological information processing as implemented by regulatory and signaling networks in living cells requires sufficient specificity of molecular interaction to distinguish signals from one another, but much of regulation and signaling…

Biomolecules · Quantitative Biology 2015-01-29 Christopher R. Myers

Motivated by recent studies of population coding in theoretical neuroscience, we examine the optimality of a recently described form of stochastic resonance known as suprathreshold stochastic resonance, which occurs in populations of noisy…

Statistical Mechanics · Physics 2007-07-02 Mark D. McDonnell , Nigel G. Stocks , Charles E. M. Pearce , Derek Abbott

This paper investigates coordination problems over packet-based communication channels. We consider the scenario in which the communication between network nodes is corrupted by unknown-but-bounded noise. We introduce a novel coordination…

Systems and Control · Computer Science 2018-08-14 Mingming Shi , Pietro Tesi , Claudio De Persis

Phase separation within polymer networks plays a central role in shaping the structure and mechanics of both synthetic materials and living cells, including the formation of biomolecular condensates within cytoskeletal networks. Previous…

Soft Condensed Matter · Physics 2025-12-01 Takahiro Yokoyama , Yicheng Qiang , David Zwicker , Arash Nikoubashman

The use of multiple frequency shift keying modulation with permutation codes addresses the problem of permanent narrowband noise disturbance in a power line communications system. In this paper, we extend this coded modulation scheme based…

Information Theory · Computer Science 2013-08-27 Yeow Meng Chee , Han Mao Kiah , Punarbasu Purkayastha , Chengmin Wang

With the proliferation of algorithmic decision-making, increased scrutiny has been placed on these systems. This paper explores the relationship between the quality of the training data and the overall fairness of the models trained with…

Computer Vision and Pattern Recognition · Computer Science 2023-05-03 Aki Barry , Lei Han , Gianluca Demartini

We present a superposition coding scheme for communication over a network, which combines partial decode and forward and noisy network coding. This hybrid scheme is termed as superposition noisy network coding. The scheme is designed and…

Information Theory · Computer Science 2011-02-24 Neevan Ramalingam , Zhengdao Wang

The performance of an error correcting code is evaluated by its error probability, rate, and en/decoding complexity. The performance of a series of codes is evaluated by, as the block lengths approach infinity, whether their error…

Information Theory · Computer Science 2021-07-15 Hsin-Po Wang
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