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We introduce a distribution-free lattice Boltzmann formulation for general compartmental reaction--diffusion systems arising in mathematical epidemiology. The proposed scheme, termed a single-step simplified lattice Boltzmann method…

Computational Physics · Physics 2026-03-23 Alessandro De Rosis

In this work, we first develop a general mesoscopic multiple-relaxation-time lattice Boltzmann (MRT-LB) model for the two-dimensional diffusion equation with the constant diffusion coefficient and source term, where the D2Q5 (five discrete…

Numerical Analysis · Mathematics 2023-08-11 Ying Chen , Zhenhua Chai , Baochang Shi

Reaction diffusion systems are often used to study pattern formation in biological systems. However, most methods for understanding their behavior are challenging and can rarely be applied to complex systems common in biological…

Analysis of PDEs · Mathematics 2013-05-24 William R. Holmes

In this paper we present a lattice Boltzmann model for combustion and detonation. In this model the fluid behavior is described by a finite-difference lattice Boltzmann model by Gan et al. [Physica A, 2008, 387: 1721]. The chemical reaction…

Soft Condensed Matter · Physics 2013-05-13 Bo Yan , Aiguo Xu , Guangcai Zhang , Yangjun Ying , Hua Li

Tissue growth underpins a wide array of biological and developmental processes, and numerical modeling of growing systems has been shown to be a useful tool for understanding these processes. However, the phenomena that can be captured are…

Soft Condensed Matter · Physics 2023-11-08 Andrew Killeen , Benjamin Partridge , Thibault Bertrand , Chiu Fan Lee

Lattice-based stochastic simulators are commonly used to study biological reaction-diffusion processes. Some of these schemes that are based on the reaction-diffusion master equation (RDME), can simulate for extended spatial and temporal…

Quantitative Methods · Quantitative Biology 2018-10-03 Wei-Xiang Chew , Kazunari Kaizu , Masaki Watabe , Sithi V. Muniandy , Koichi Takahashi , Satya N. V. Arjunan

This paper discusses how to develop a high-order multiple-relaxation-time lattice Boltzmann (MRT-LB) model for the general d(>=1)-dimensional diagonal-anisotropic diffusion equation. Such an MRT-LB model considers the transformation matrix…

Numerical Analysis · Mathematics 2025-03-11 Ying Chen , Zhenhua Chai , Baochang Shi

A general and local reactive boundary condition (RBC) for studying first-order equilibrium reactions using the lattice Boltzmann method (LBM) is presented. Its main characteristics are accurate reproduction of wall diffusion, invariance to…

Computational Physics · Physics 2023-06-21 Julius Weinmiller , Martin P. Lautenschlaeger , Benjamin Kellers , Timo Danner , Arnulf Latz

A new lattice Boltzmann model (LBM) for chemically reactive mixtures is presented. The approach capitalizes on the recently introduced thermodynamically consistent LBM for multicomponent mixtures of ideal gases. Similar to the non-reactive…

Fluid Dynamics · Physics 2021-10-04 N. Sawant , B. Dorschner , I. V. Karlin

We report an implementation of the lattice Boltzmann method (LBM) to integrate the Bloch-Torrey equation, which describes the evolution of the transverse magnetization vector and the fate of the signal of diffusion magnetic resonance…

Medical Physics · Physics 2020-10-14 Noel M. Naughton , Caroline G. Tennyson , John G. Georgiadis

In this article we propose a unified framework in order to study reaction-diffusion systems containing self- and cross-diffusion using a free energy approach. This framework naturally leads to the formulation of an energy law, and to a…

Computational Physics · Physics 2021-10-12 Benjamin Aymard

Many physical systems are described by probability distributions that evolve in both time and space. Modeling these systems is often challenging to due large state space and analytically intractable or computationally expensive dynamics. To…

Biological Physics · Physics 2019-07-03 Oliver K. Ernst , Tom Bartol , Terrence Sejnowski , Eric Mjolsness

Reaction-diffusion systems have been proposed as a model for pattern formation and morphogenesis. The Fickian diffusion typically employed in these constructions model the Brownian motion of particles. The biological and chemical elements…

Quantitative Methods · Quantitative Biology 2023-11-09 Siddhartha Srivastava , Krishna Garikipati

In this paper, we first present a multiple-relaxation-time lattice Boltzmann (MRT-LB) model for one-dimensional diffusion equation where the D1Q3 (three discrete velocities in one-dimensional space) lattice structure is considered. Then…

Numerical Analysis · Mathematics 2021-08-04 Yuxin Lin , Ning Hong , Baochang Shi , Zhenhua Chai

Microscopic models of reaction-diffusion processes on the cell membrane can link local spatiotemporal effects to macroscopic self-organized patterns often observed on the membrane. Simulation schemes based on the microscopic lattice method…

Subcellular Processes · Quantitative Biology 2019-04-24 Wei-Xiang Chew , Kazunari Kaizu , Masaki Watabe , Sithi V. Muniandy , Koichi Takahashi , Satya N. V. Arjunan

We investigate pattern formation in a driven mixture of two repulsive particles by introducing a Field-based Lattice Model (FLM), a hybrid model that combines aspects of the driven Widom-Rowlison lattice gas (DWRLG) and its statistical…

Statistical Mechanics · Physics 2025-12-08 G. E. Freire Oliveira , R. Dickman , M. O. Lavrentovich , R. K. P. Zia

Diffusion phenomena in a multiple component lattice Boltzmann Equation (LBE) model are discussed in detail. The mass fluxes associated with different mechanical driving forces are obtained using a Chapman-Enskog analysis. This model is…

comp-gas · Physics 2009-10-28 Xiaowen Shan , Gary Doolen

We study reaction-diffusion systems beyond the Markovian approximation to take into account the effect of memory on the formation of spatio-temporal patterns. Using a non-Markovian Brusselator model as a paradigmatic example, we show how to…

Pattern Formation and Solitons · Physics 2019-12-04 Reza Torabi , Jörn Davidsen

A new lattice Boltzmann model (LBM) is presented to describe chemically reacting multicomponent fluid flow in homogenised porous media. In this work, towards further generalizing the multicomponent reactive lattice Boltzmann model, we…

Fluid Dynamics · Physics 2024-09-06 Nilesh Sawant , Ilya Karlin

The lattice Boltzmann method (LBM) is a popular numerical framework to investigate single and multiphase flow though porous media. For estimation of absolute permeability based on micro-tomographic images of the porous medium, the…

Computational Physics · Physics 2019-03-01 Parthib Rao , Laura Schaefer
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