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Spatial systems with heterogeneities are ubiquitous in nature, from precipitation, temperature and soil gradients controlling vegetation growth to morphogen gradients controlling gene expression in embryos. Such systems, generally described…

Dynamical Systems · Mathematics 2023-05-10 Denis D. Patterson , Simon A. Levin , A. Carla Staver , Jonathan D. Touboul

We analyze a class of network motifs in which a short, two-node positive feed- back motif is inserted in a three-node negative feedback loop. We demonstrate that such networks can undergo a bifurcation to a state where a stable fixed point…

Molecular Networks · Quantitative Biology 2012-09-10 Weihan Li , Sandeep Krishna , Simone Pigolotti , Namiko Mitarai , Mogens H. Jensen

We identify the mechanism behind the existence of intensity induced chimera states in globally coupled oscillators. We find that the effect of intensity in the system is to cause multistability by increasing the number of fixed points. This…

Adaptation and Self-Organizing Systems · Physics 2015-06-22 V. K. Chandrasekar , R. Gopal , A. Venkatesan , M. Lakshmanan

In this paper, dynamical systems theory and bifurcation theory are applied to investi- gate the rich dynamical behaviours observed in three simple disease models. The 2- and 3-dimensional models we investigate have arisen in previous…

Dynamical Systems · Mathematics 2015-04-22 Wenjing Zhang , Pei Yu , Lindi M. Wahl

When a biological system robustly corrects component-level errors, the direct pressure on component performance declines. Components may become less reliable, maintain more genetic variability, or drift neutrally in design, creating the…

Populations and Evolution · Quantitative Biology 2023-12-27 Steven A. Frank

A technique is introduced which allows to generate -- starting from any solvable discrete-time dynamical system involving N time-dependent variables -- new, generally nonlinear, generations of discrete-time dynamical systems, also involving…

Mathematical Physics · Physics 2017-06-07 Oksana Bihun , Francesco Calogero

We consider a heteroclinic network in the framework of winnerless competition of species. It consists of two levels of heteroclinic cycles. On the lower level, the heteroclinic cycle connects three saddles, each representing the survival of…

Adaptation and Self-Organizing Systems · Physics 2018-12-26 Maximilian Voit , Hildegard Meyer-Ortmanns

A two-dimensional system of differential equations with delay modelling the glucose-insulin interaction processes in the human body is considered. Sufficient conditions are derived for the unique positive equilibrium in the system to be…

Dynamical Systems · Mathematics 2020-12-11 M. Angelova , G. Beliakov , A. Ivanov , S. Shelyag

Organisms often use cyclic changes in the concentrations of chemicals species to precisely time biological functions. Underlying these biochemical clocks are chemical reactions and transport processes, which are inherently stochastic.…

Statistical Mechanics · Physics 2020-02-06 Clara del Junco , Suriyanarayanan Vaikuntanathan

This paper studies a control method for switching stable coexisting attractors of a class of non-autonomous dynamical systems. The central idea is to introduce a continuous path for the system's trajectory to transition from its original…

Dynamical Systems · Mathematics 2022-08-01 Zhi Zhang , Joseph Páez Chávez , Jan Sieber , Yang Liu

Sustained rhythmic oscillations, pulsing dynamics, emerge spontaneously when the local connection scheme is randomised in 3-value cellular automata that feature"glider" dynamics. Time-plots of pulsing measures maintain a distinct waveform…

Cellular Automata and Lattice Gases · Physics 2021-03-02 Andrew Wuensche , Edward Coxon

Unidirectionally coupled dynamical system is studied by focusing on the input (or boundary) dependence. Due to convective instability, noise at an up-flow is spatially amplified to form an oscillation. The response, given by the down-flow…

chao-dyn · Physics 2009-10-31 Koichi Fujimoto , Kunihiko Kaneko

Organisms are equipped with regulatory systems that display a variety of dynamical behaviours ranging from simple stable steady states, to switching and multistability, to oscillations. Earlier work has shown that oscillations in protein…

Molecular Networks · Quantitative Biology 2009-11-13 Simone Pigolotti , Sandeep Krishna , Mogens H. Jensen

Discrete dynamical systems in which model components take on categorical values have been successfully applied to biological networks to study their global dynamic behavior. Boolean models in particular have been used extensively. However,…

Quantitative Methods · Quantitative Biology 2021-09-09 Etan Basser-Ravitz , Arman Darbar , Julia Chifman

Many physical, chemical and biological systems exhibit a cooperative or sigmoidal response with respect to the input. In biochemistry, such behavior is called an allosteric effect. Here we demonstrate that a system with such properties can…

Adaptation and Self-Organizing Systems · Physics 2015-10-28 Hiroshi Ueno , Tatsuaki Tsuruyama , Bogdan Nowakowski , Jerzy Gorecki , Kenichi Yoshikawa

In this paper we demonstrate a route to develop coherence in a system of non-driven oscillators. Here, the coherence is brought about via physical collisions through which the oscillators exchange energy. While coherence in the classical…

Chaotic Dynamics · Physics 2021-11-18 Ayanesh Maiti , Shankar Ghosh

This paper addresses the amplitude and phase dynamics of a large system non-linear coupled, non-identical damped harmonic oscillators, which is based on recent research in coupled oscillation in optomechanics. Our goal is to investigate the…

Chaotic Dynamics · Physics 2015-06-23 P. Cudmore , C. A. Holmes

We investigate the dynamical behavior of simple modules composed of two genes with two or three regulating connections. Continuous dynamics for mRNA and protein concentrations is compared to a Boolean model for gene activity. Using a…

Molecular Networks · Quantitative Biology 2013-05-29 Eva Gehrmann , Barbara Drossel

Nonlinear oscillators are commonly encountered in a wide range of physical and engineering systems, exhibiting rich and complex dynamics. Among these, the Van der Pol oscillator is well known for its self-sustained limit cycle behavior.…

Chaotic Dynamics · Physics 2025-11-17 Samaira Tibrewal , Soumyajit Seth

Spatio-temporal bifurcations and complex dynamics in globally coupled intrinsically bistable electrochemical systems with an S-shaped current-voltage characteristic under galvanostatic control are studied theoretically on a one-dimensional…

Pattern Formation and Solitons · Physics 2016-08-16 F. Plenge , P. Rodin , E. Schöll , K. Krischer