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Related papers: Detecting local network motifs

200 papers

Most real-world networks are embedded in latent geometries. If a node in a network is found in the vicinity of another node in the latent geometry, the two nodes have a disproportionately high probability of being connected by a link. The…

Physics and Society · Physics 2024-06-19 Bukyoung Jhun

The structure of complex networks can be characterized by counting and analyzing network motifs. Motifs are small subgraphs that occur repeatedly in a network, such as triangles or chains. Recent work has generalized motifs to temporal and…

Physics and Society · Physics 2022-01-04 Timothy LaRock , Ingo Scholtes , Tina Eliassi-Rad

The investigation of community structures in networks is an important issue in many domains and disciplines. This problem is relevant for social tasks (objective analysis of relationships on the web), biological inquiries (functional…

Statistical Mechanics · Physics 2009-11-10 Filippo Radicchi , Claudio Castellano , Federico Cecconi , Vittorio Loreto , Domenico Parisi

Topological network motifs represent functional relationships within and between regulatory and protein-protein interaction networks. Enriched motifs often aggregate into self-contained units forming functional modules. Theoretical models…

Molecular Networks · Quantitative Biology 2011-09-12 Tom Michoel , Anagha Joshi , Bruno Nachtergaele , Yves Van de Peer

Network is a simple but powerful representation of real-world complex systems. Network community analysis has become an invaluable tool to explore and reveal the internal organization of nodes. However, only a few methods were directly…

Social and Information Networks · Computer Science 2016-03-23 Xuemei Ning , Zhaoqi Liu , Shihua Zhang

We propose a method for characterizing large complex networks by introducing a new matrix structure, unique for a given network, which encodes structural information; provides useful visualization, even for very large networks; and allows…

Disordered Systems and Neural Networks · Physics 2008-02-28 J. P. Bagrow , E. M. Bollt , J. D. Skufca , D. ben-Avraham

Modularity structures are common in various social and biological networks. However, its dynamical origin remains an open question. In this work, we set up a dynamical model describing the evolution of a social network. Based on the…

Physics and Society · Physics 2011-08-19 Menghui Li , Shuguang Guan , Choy-Heng Lai

Hidden community is a useful concept proposed recently for social network analysis. To handle the rapid growth of network scale, in this work, we explore the detection of hidden communities from the local perspective, and propose a new…

Social and Information Networks · Computer Science 2021-12-09 Meng Wang , Boyu Li , Kun He , John E. Hopcroft

We consider a crucial aspect of self-organization of a sensor network consisting of a large set of simple sensor nodes with no location hardware and only very limited communication range. After having been distributed randomly in a given…

Data Structures and Algorithms · Computer Science 2007-05-23 Sandor P. Fekete , Alexander Kroeller , Dennis Pfisterer , Stefan Fischer , Carsten Buschmann

We propose and study a set of algorithms for discovering community structure in networks -- natural divisions of network nodes into densely connected subgroups. Our algorithms all share two definitive features: first, they involve iterative…

Statistical Mechanics · Physics 2009-11-10 M. E. J. Newman , M. Girvan

Urban road networks are typical complex systems, which are crucial to our society and economy. In this study, topological characteristics of a number of urban road networks based on purely physical roads rather than routes of vehicles or…

Physics and Society · Physics 2019-07-30 Wen-Long Shang , Huibo Bi , Yanyan Chen , Washington Ochieng

Network models have been widely used to study diverse systems and analyze their dynamic behaviors. Given the structural variability of networks, an intriguing question arises: Can we infer the type of system represented by a network based…

Social and Information Networks · Computer Science 2025-05-29 Gonzalo Travieso , Joao Merenda , Odemir M. Bruno

The statistical mechanical approach to complex networks is the dominant paradigm in describing natural and societal complex systems. The study of network properties, and their implications on dynamical processes, mostly focus on locally…

Statistical Mechanics · Physics 2013-06-27 Giovanni Petri , Martina Scolamiero , Irene Donato , Francesco Vaccarino

To understand the structure of a large-scale biological, social, or technological network, it can be helpful to decompose the network into smaller subunits or modules. In this article, we develop an information-theoretic foundation for the…

Physics and Society · Physics 2007-05-23 Martin Rosvall , Carl T. Bergstrom

Social networks facilitate the social space where actors or the users have ties among them. The ties and their patterns are based on their life styles and communication. Similarly, in online social media networks like Facebook, Twitter,…

Social and Information Networks · Computer Science 2019-04-11 Victor Stany Rozario , A. Z. M. Ehtesham Chowdhury , Muhammad Sarwar Jahan Morshed

A significant problem in analysis of complex network is to reveal community structure, in which network nodes are tightly connected in the same communities, between which there are sparse connections. Previous algorithms for community…

Physics and Society · Physics 2018-04-25 Jingming Zhang , Jianjun Cheng , Xing Su , Xinhong Yin , Shiyan Zhao , Xiaoyun Chen

We study a generic family of nonlinear dynamics on undirected networks generalising linear consensus. We find a compact expression for its equilibrium points in terms of the topology of the network and classify their stability using the…

Dynamical Systems · Mathematics 2021-12-07 Marc Homs-Dones , Karel Devriendt , Renaud Lambiotte

Motif discovery is a powerful and insightful method to quantify network structures and explore their function. As a case study, we present a comprehensive analysis of regulatory motifs in the connectome of the model organism Caenorhabditis…

Molecular Networks · Quantitative Biology 2024-09-02 Deepak Sharma , Matthias Renz , Philipp Hövel

We propose a model for network community detection using topological data analysis, a branch of modern data science that leverages theory from algebraic topology to statistical analysis and machine learning. Specifically, we use cellular…

Social and Information Networks · Computer Science 2023-10-10 Arne Wolf , Anthea Monod

Topology identification and inference of processes evolving over graphs arise in timely applications involving brain, transportation, financial, power, as well as social and information networks. This chapter provides an overview of graph…

Signal Processing · Electrical Eng. & Systems 2025-12-12 Gonzalo Mateos , Yanning Shen , Georgios B. Giannakis , Ananthram Swami