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Path planning for walking characters in complicated virtual environments is a fundamental task in simulations and games. A navigation mesh is a data structure that allows efficient path planning. The Explicit Corridor Map (ECM) is a…

Computational Geometry · Computer Science 2017-07-27 Wouter van Toll , Atlas F. Cook , Marc J. van Kreveld , Roland Geraerts

Mixtures of linear dynamical systems (MoLDS) provide a path to model time-series data that exhibit diverse temporal dynamics across trajectories. However, its application remains challenging in complex and noisy settings, limiting its…

Machine Learning · Computer Science 2026-03-02 Lulu Gong , Shreya Saxena

Recordings of whole brain activity with single neuron resolution are now feasible in simple organisms. Yet, it is still challenging to appropriately simplify such complex, noisy, and multivariate data in order to reveal general principles…

Neurons and Cognition · Quantitative Biology 2017-11-27 Connor Brennan , Alex Proekt

Medical image segmentation, particularly in multi-domain scenarios, requires precise preservation of anatomical structures across diverse representations. While deep learning has advanced this field, existing models often struggle with…

Computer Vision and Pattern Recognition · Computer Science 2025-05-27 Afshin Bozorgpour , Sina Ghorbani Kolahi , Reza Azad , Ilker Hacihaliloglu , Dorit Merhof

One of the challenges of studying common neurological disorders is disease heterogeneity including differences in causes, neuroimaging characteristics, comorbidities, or genetic variation. Normative modelling has become a popular method for…

Computer Vision and Pattern Recognition · Computer Science 2023-10-03 Ana Lawry Aguila , James Chapman , Andre Altmann

Behavioural experiments often happen in specialised arenas, but this may confound the analysis. To address this issue, we provide tools to study mice in the home-cage environment, equipping biologists with the possibility to capture the…

Computer Vision and Pattern Recognition · Computer Science 2024-06-25 Michael P. J. Camilleri , Rasneer S. Bains , Christopher K. I. Williams

Coronal mass ejections (CMEs) are a major driver of space weather. To assess CME geoeffectiveness, among other scientific goals, it is necessary to reliably identify and characterize their morphology and kinematics in coronagraph images.…

Learning the dynamics of a physical system wherein an autonomous agent operates is an important task. Often these systems present apparent geometric structures. For instance, the trajectories of a robotic manipulator can be broken down into…

Systems and Control · Electrical Eng. & Systems 2021-04-08 Philippe Hansen-Estruch , Wenling Shang , Lerrel Pinto , Pieter Abbeel , Stas Tiomkin

Pap smear testing has been widely used for detecting cervical cancers based on the morphology properties of cell nuclei in microscopic image. An accurate nuclei segmentation could thus improve the success rate of cervical cancer screening.…

Computer Vision and Pattern Recognition · Computer Science 2019-05-15 Jie Zhao , Quanzheng Li , Xiang Li , Hongfeng Li , Li Zhang

Automated analysis of mouse behaviours is crucial for many applications in neuroscience. However, quantifying mouse behaviours from videos or images remains a challenging problem, where pose estimation plays an important role in describing…

Computer Vision and Pattern Recognition · Computer Science 2021-08-03 Feixiang Zhou , Zheheng Jiang , Zhihua Liu , Fang Chen , Long Chen , Lei Tong , Zhile Yang , Haikuan Wang , Minrui Fei , Ling Li , Huiyu Zhou

Understanding individual, group and event level emotions along with contextual information is crucial for analyzing a multi-person social situation. To achieve this, we frame emotion comprehension as the task of predicting fine-grained…

Computer Vision and Pattern Recognition · Computer Science 2026-01-13 Anubhav Kataria , Surbhi Madan , Shreya Ghosh , Tom Gedeon , Abhinav Dhall

The emerging field of optogenetics allows for optical activation or inhibition of neurons and other tissue in the nervous system. In 2005 optogenetic proteins were expressed in the nematode C. elegans for the first time. Since then, C.…

Neurons and Cognition · Quantitative Biology 2013-05-13 Steven J. Husson , Alexander Gottschalk , Andrew M. Leifer

Walking animals, like stick insects, cockroaches or ants, demonstrate a fascinating range of locomotive abilities and complex behaviors. The locomotive behaviors can consist of a variety of walking patterns along with adaptation that allow…

Neural and Evolutionary Computing · Computer Science 2016-08-08 Sakyasingha Dasgupta , Dennis Goldschmidt , Florentin Wörgötter , Poramate Manoonpong

Nematode worms are one of most abundant metazoan groups on the earth, occupying diverse ecological niches. Accurate recognition or identification of nematodes are of great importance for pest control, soil ecology, bio-geography, habitat…

Quantitative Methods · Quantitative Biology 2021-03-16 Xuequan Lu , Yihao Wang , Sheldon Fung , Xue Qing

We introduce a generic, purely mechanical model for environment sensitive motion of mammalian cells that is applicable to chemotaxis, haptotaxis, and durotaxis as modes of motility. It is able to theoretically explain all relevant…

Cell Behavior · Quantitative Biology 2016-05-09 Patrick Bitter , Kristof Leon Beck , Peter Lenz

Learning on triangle meshes has recently proven to be instrumental to a myriad of tasks, from shape classification, to segmentation, to deformation and animation, to mention just a few. While some of these applications are tackled through…

Graphics · Computer Science 2025-05-27 Michal Edelstein , Hsueh-Ti Derek Liu , Mirela Ben-Chen

Masked autoencoders (MAE) have shown great promise in medical image classification. However, the random masking strategy employed by traditional MAEs may overlook critical areas in medical images, where even subtle changes can indicate…

Computer Vision and Pattern Recognition · Computer Science 2026-05-27 Joao Batista Florindo , Viviane de Moura

Locomotion and gross morphology have been important phenotypes for C. elegans genetics since the inception of the field and remain relevant. In parallel with developments in genome sequencing and editing, phenotyping methods have become…

Quantitative Methods · Quantitative Biology 2014-07-28 Eviatar I. Yemini , André E. X. Brown

Although deep CNNs have brought significant improvement to image saliency detection, most CNN based models are sensitive to distortion such as compression and noise. In this paper, we propose an end-to-end generic salient object…

Computer Vision and Pattern Recognition · Computer Science 2020-01-23 Delu Zeng , Yixuan He , Li Liu , Zhihong Chen , Jiabin Huang , Jie Chen , John Paisley

Cognitive diagnosis is a crucial task in computational education, aimed at evaluating students' proficiency levels across various knowledge concepts through exercises. Current models, however, primarily rely on students' answered exercises,…

Computers and Society · Computer Science 2023-12-19 Haiping Ma , Changqian Wang , Hengshu Zhu , Shangshang Yang , Xiaoming Zhang , Xingyi Zhang