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We present SPUX - a modular framework for Bayesian inference enabling uncertainty quantification and propagation in linear and nonlinear, deterministic and stochastic models, and supporting Bayesian model selection. SPUX can be coupled to…

Computation · Statistics 2021-05-14 Jonas Šukys , Marco Bacci

Stochastic differential equations (SDEs) are an important class of time-series models, used to describe stochastic systems evolving in continuous time. Simulating paths from these processes, particularly after conditioning on noisy…

Computation · Statistics 2026-02-03 Xinyi Pei , Minhyeok Kim , Vinayak Rao

The Smoothed Particles Hydrodynamics (SPH) is a particle-based, meshfree, Lagrangian method used to simulate multidimensional fluids with arbitrary geometries, most commonly employed in astrophysics, cosmology, and computational…

Computational Engineering, Finance, and Science · Computer Science 2022-12-21 Aurélien Cavelan , Rubén M. Cabezón , Michal Grabarczyk , Florina M. Ciorba

Heterogeneous system-on-chips (SoCs) have become the standard embedded computing platforms due to their potential to deliver superior performance and energy efficiency compared to homogeneous architectures. They can be particularly suited…

Hardware Architecture · Computer Science 2019-08-13 Samet E. Arda , Anish NK , A. Alper Goksoy , Joshua Mack , Nirmal Kumbhare , Anderson L. Sartor , Ali Akoglu , Radu Marculescu , Umit Y. Ogras

This paper discusses the latest generation of the MONARC (MOdels of Networked Analysis at Regional Centers) simulation framework, as a design and modelling tool for large scale distributed systems applied to HEP experiments. A…

Distributed, Parallel, and Cluster Computing · Computer Science 2011-06-28 Ciprian Dobre , Corina Stratan

Full detector simulation was among the largest CPU consumer in all CERN experiment software stacks for the first two runs of the Large Hadron Collider (LHC). In the early 2010's, the projections were that simulation demands would scale…

Efficient job scheduling and resource management contribute towards system throughput and efficiency maximization in high-performance computing (HPC) systems. In this paper, we introduce a scalable job scheduling and resource management…

Distributed, Parallel, and Cluster Computing · Computer Science 2025-01-31 Abubeker Abdurahman , Abrar Hossain , Kevin A Brown , Kazutomo Yoshii , Kishwar Ahmed

This work describes a domain embedding technique between two non-matching meshes used for generating realizations of spatially correlated random fields with applications to large-scale sampling-based uncertainty quantification. The goal is…

Numerical Analysis · Mathematics 2017-12-20 Sarah Osborn , Patrick Zulian , Thomas Benson , Umberto Villa , Rolf Krause , Panayot S. Vassilevski

Single-Program-Multiple-Data (SPMD) parallelism has recently been adopted to train large deep neural networks (DNNs). Few studies have explored its applicability on heterogeneous clusters, to fully exploit available resources for large…

Distributed, Parallel, and Cluster Computing · Computer Science 2024-01-12 Shiwei Zhang , Lansong Diao , Chuan Wu , Zongyan Cao , Siyu Wang , Wei Lin

Large language models (LLMs) have catalyzed an upsurge in automatic code generation, garnering significant attention for register transfer level (RTL) code generation. Despite the potential of RTL code generation with natural language, it…

Hardware Architecture · Computer Science 2024-08-14 Chenwei Xiong , Cheng Liu , Huawei Li , Xiaowei Li

The rapidly growing popularity and scale of data-parallel workloads demand a corresponding increase in raw computational power of GPUs (Graphics Processing Units). As single-GPU systems struggle to satisfy the performance demands, multi-GPU…

Distributed, Parallel, and Cluster Computing · Computer Science 2018-11-15 Yifan Sun , Trinayan Baruah , Saiful A. Mojumder , Shi Dong , Rafael Ubal , Xiang Gong , Shane Treadway , Yuhui Bao , Vincent Zhao , José L. Abellán , John Kim , Ajay Joshi , David Kaeli

High Energy Physics (HEP) experiments are making increasing use of GPUs and GPU dominated High Performance Computer facilities. Both the software and hardware of these systems are rapidly evolving, creating challenges for experiments to…

High Energy Physics - Experiment · Physics 2025-05-15 Mohammad Atif , Pengfei Ding , Ka Hei Martin Kwok , Charles Leggett

Accurate, global Potential Energy Surfaces (PES) expressed in sum-of-products (SOP) form are a prerequisite for efficient high-dimensional quantum dynamics simulations using the MCTDH method. This work introduces a methodology for…

Chemical Physics · Physics 2026-03-31 Antoine Aerts

Quantum computers are becoming a reality and numerous quantum computing applications with a near-term perspective (e.g., for finance, chemistry, machine learning, and optimization) and with a long-term perspective (e.g., for cryptography or…

MPJ Express is a messaging system that allows computational scientists to write and execute parallel Java applications on High Performance Computing (HPC) hardware. Despite its successful adoption in the Java HPC community, the MPJ Express…

Distributed, Parallel, and Cluster Computing · Computer Science 2014-08-28 Aleem Akhtar , Aamir Shafi , Mohsan Jameel

Recent advances in machine learning force fields (MLFF) have significantly extended the reach of atomistic simulations. Continuous progress in this field requires reliable reference datasets, accurate MLFF architectures, and efficient…

Chemical Physics · Physics 2025-10-24 Tobias Henkes , Shubham Sharma , Alexandre Tkatchenko , Mariana Rossi , Igor Poltavskyi

Hybrid quantum-classical applications pose significant resource management challenges due to heterogeneity and dynamism in both infrastructure and workloads. Quantum-HPC environments integrate quantum processing units (QPUs) with diverse…

Quantum Physics · Physics 2026-04-07 Pradeep Mantha , Florian J. Kiwit , Nishant Saurabh , Shantenu Jha , Andre Luckow

Harnessing modern parallel computing resources to achieve complex multi-physics simulations is a daunting task. The Multiphysics Object Oriented Simulation Environment (MOOSE) aims to enable such development by providing simplified…

In this era of diverse and heterogeneous computer architectures, the programmability issues, such as productivity and portable efficiency, are crucial to software development and algorithm design. One way to approach the problem is to step…

Mathematical Software · Computer Science 2012-07-10 Mauro Bianco , Ugo Varetto

Neural networks are emerging as a tool for scalable data-driven simulation of high-dimensional dynamical systems, especially in settings where numerical methods are infeasible or computationally expensive. Notably, it has been shown that…

Machine Learning · Computer Science 2024-09-16 Koen Minartz , Yoeri Poels , Simon Koop , Vlado Menkovski