Related papers: Optimal Trade-Off for Succinct String Indexes
The Shortest Common Superstring (SCS) problem asks for the shortest string that contains each of a given set of strings as a substring. Its reverse-complement variant, the Shortest Common Superstring problem with Reverse Complements…
We consider compact representations of collections of similar strings that support random access queries. The collection of strings is given by a rooted tree where edges are labeled by an edit operation (inserting, deleting, or replacing a…
Symbolic Regression tries to find a mathematical expression that describes the relationship of a set of explanatory variables to a measured variable. The main objective is to find a model that minimizes the error and, optionally, that also…
For a text given in advance, the substring minimal suffix queries ask to determine the lexicographically minimal non-empty suffix of a substring specified by the location of its occurrence in the text. We develop a data structure answering…
The problem of {\em efficiently} finding the best match for a query in a given set with respect to the Euclidean distance or the cosine similarity has been extensively studied in literature. However, a closely related problem of efficiently…
We study the problem of deriving compressibility measures for Piecewise Linear Approximations (PLAs), i.e., error-bounded approximations of a set of two-dimensional increasing data points using a sequence of segments. Such approximations…
A fundamental open problem in learning theory is to characterize the best-case teaching dimension $\operatorname{TS}_{\min}$ of a concept class $\mathcal{C}$ with finite VC dimension $d$. Resolving this problem will, in particular, settle…
We design succinct encodings of {\it series-parallel, block-cactus} and {\it 3-leaf power} graphs while supporting the basic navigational queries such as degree, adjacency and neighborhood {\it optimally} in the RAM model with logarithmic…
It has been shown in the indexing literature that there is an essential difference between prefix/range searches on the one hand, and predecessor/rank searches on the other hand, in that the former provably allows faster query resolution.…
Suppose that we are given a string $s$ of length $n$ over an alphabet $\{0,1,\ldots,n^{O(1)}\}$ and $\delta$ is the string complexity of $s$, a known compression measure. We describe an index on $s$ with $O(\delta\log\frac{n}{\delta})$…
This work presents a discovery to advance the wisdom in a particular Succinct Data Structure: Wavelet Tree (Grossi, Gupta, and Vitter 2003). The discovery is first made by showing the feasibility of Reversed Indexes = Values: for integers…
We describe a data structure that supports access, rank and select queries, as well as symbol insertions and deletions, on a string $S[1,n]$ over alphabet $[1..\sigma]$ in time $O(\lg n/\lg\lg n)$, which is optimal even on binary sequences…
Interdiction problems ask about the worst-case impact of a limited change to an underlying optimization problem. They are a natural way to measure the robustness of a system, or to identify its weakest spots. Interdiction problems have been…
A substring Q of a string S is called a shortest unique substring (SUS) for interval [s,t] in S, if Q occurs exactly once in S, this occurrence of Q contains interval [s,t], and every substring of S which contains interval [s,t] and is…
Erd\H{o}s and West (Discrete Mathematics'85) considered the class of $n$ vertex intersection graphs which have a {\em $d$-dimensional} {\em $t$-representation}, that is, each vertex of a graph in the class has an associated set consisting…
This thesis concerns sequential-access data compression, i.e., by algorithms that read the input one or more times from beginning to end. In one chapter we consider adaptive prefix coding, for which we must read the input character by…
The Suffix Array is a classic text index enabling on-line pattern matching queries via simple binary search. The main drawback of the Suffix Array is that it takes linear space in the text's length, even if the text itself is extremely…
Given an $n$-bit array $A$, the succinct rank data structure problem asks to construct a data structure using space $n+r$ bits for $r\ll n$, supporting rank queries of form $\mathtt{rank}(x)=\sum_{i=0}^{x-1} A[i]$. In this paper, we design…
Developing efficient sequential bidding strategies for repeated auctions is an important practical challenge in various marketing tasks. In this setting, the bidding agent obtains information, on both the value of the item at sale and the…
Two decades ago, a breakthrough in indexing string collections made it possible to represent them within their compressed space while at the same time offering indexed search functionalities. As this new technology permeated through…