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A principle of evolutionary adaptation is applied to the Lotka--Volterra models, in particular to the food webs. We present a relatively simple computational algorithm of optimization with respect to a given criterion. This algorithm boils…

Populations and Evolution · Quantitative Biology 2021-09-06 Alexander S. Bratus , Anastasiia V. Korushkina , Artem S. Novozhilov

Lately, network sampling proved as a promising tool for simplifying large real-world networks and thus providing for their faster and more efficient analysis. Still, understanding the changes of network structure and properties under…

Social and Information Networks · Computer Science 2014-05-14 Neli Blagus , Gregor Weiss , Lovro Šubelj

Previous work has shown that species interacting in an ecosystem and actors transacting in an economic context may have notable similarities in behavior. However, the specific mechanism that may underlie similarities in nature and human…

Physics and Society · Physics 2011-10-04 Serguei Saavedra , Felix Reed-Tsochas , Brian Uzzi

Many real-world complex systems such as social, biological, information as well as technological systems results of a decentralized and unplanned evolution which leads to a common structuration. Irrespective of their origin, these so-called…

Social and Information Networks · Computer Science 2013-05-03 Chantal Cherifi , Jean-François Santucci

Networks are widely used in the biological, physical, and social sciences as a concise mathematical representation of the topology of systems of interacting components. Understanding the structure of these networks is one of the outstanding…

Data Analysis, Statistics and Probability · Physics 2007-06-21 M. E. J. Newman , E. A. Leicht

We analyze plankton-nutrient food chain models composed of phytoplankton, herbivorous zooplankton and a limiting nutrient. These models have played a key role in understanding the dynamics of plankton in the oceanic layer. Given the strong…

Probability · Mathematics 2024-07-10 Alexandru Hening , Nguyen Trong Hieu , Dang Hai Nguyen , Nhu Ngoc Nguyen

One of the central themes in modern ecology is the enduring debate on whether there is a relationship between the complexity of a biological community and its stability. In this paper, we focus on the role of detritus and spatial dispersion…

Populations and Evolution · Quantitative Biology 2014-06-11 Andrzej Pękalski , Janusz Szwabiński

Social networks have been widely studied over the last century from multiple disciplines to understand societal issues such as inequality in employment rates, managerial performance, and epidemic spread. Today, these and many more issues…

Social and Information Networks · Computer Science 2023-06-21 Lisette Espín-Noboa , Tiago Peixoto , Fariba Karimi

Recent studies of animal social networks have significantly increased our understanding of animal behavior, social interactions, and many important ecological and epidemiological processes. However, most of the studies are at low temporal…

Populations and Evolution · Quantitative Biology 2017-02-08 Shi Chen , Amiyaal Ilany , Brad J. White , Michael W. Sanderson , Cristina Lanzas

Community detection is considered as a fundamental task in analyzing social networks. Even though many techniques have been proposed for community detection, most of them are based exclusively on the connectivity structures. However, there…

Social and Information Networks · Computer Science 2019-12-25 Hadi Zare , Mahdi Hajiabadi , Mahdi Jalili

Ecological networks are theoretical abstractions that represent ecological communities. These networks are usually defined as static entities, in which the occurrence of a particular interaction between species is considered fixed despite…

Populations and Evolution · Quantitative Biology 2016-04-12 Daniela N. Lopez , Patricio A. Camus , Nelson Valdivia , Sergio A. Estay

We model the Internet as a network of interconnected Autonomous Systems which self-organize under an absolute lack of centralized control. Our aim is to capture how the Internet evolves by reproducing the assembly that has led to its actual…

Physics and Society · Physics 2009-11-11 M. Angeles Serrano , Marian Boguna , Albert Diaz-Guilera

An agent-based model of population dynamics is presented. The model has as its expected behaviour the population dynamics of the equation-based Webworld model, within which large communities of species can be grown on evolutionary time…

Populations and Evolution · Quantitative Biology 2008-11-18 Craig R. Powell

Species interaction networks are a powerful tool for describing ecological communities; they typically contain nodes representing species, and edges representing interactions between those species. For the purposes of drawing abstract…

Machine Learning · Computer Science 2025-02-25 Sanaz Hasanzadeh Fard , Emily Dolson

We performed a stability analysis of 119 quantitative food webs which were compiled using a standard methodology to build Ecopath mass-balance models. Our analysis reveals that classic descriptors of complexity do not affect stability in…

Populations and Evolution · Quantitative Biology 2013-07-23 Claire Jacquet , Charlotte Moritz , Lyne Morissette , Pierre Legagneux , François Massol , Phillippe Archambault , Dominique Gravel

Effects of changes in functional composition of soil communities on nutrient cycling are still not well understood. Models simulating community dynamics overcome the technical challenges of conducting species removal experiments in the…

Populations and Evolution · Quantitative Biology 2019-02-13 Idaline Laigle , Isabelle Aubin , Dominique Gravel

Social relations have been shown to impact individual and group success in farm animal populations. Fundamental to addressing these relationships is an understanding of the social network structure resulting from the co-habitation and…

Physics and Society · Physics 2025-06-10 Emil Grosfilley , Yujie Mu , Dap De Bruijckere

Ecological modelling of increasingly more complex microbial populations is necessary to reflect the highly functional and diverse behaviour inherent to many systems found in reality. Anaerobic digestion is one such process that has…

Dynamical Systems · Mathematics 2015-08-24 Tewfik Sari , Matthew J. Wade

The true slime mold \textit{Physarum polycephalum} has the remarkable capability to perform self-organized activities such as network formation among food sources. Despite well reproducing the emergence of slime networks, existing models…

Populations and Evolution · Quantitative Biology 2025-08-04 Damiano Reginato , Daniele Proverbio , Giulia Giordano

Recent control trends are increasingly relying on communication networks and wireless channels to close the loop for Internet-of-Things applications. Traditionally these approaches are model-based, i.e., assuming a network or channel model…

Systems and Control · Electrical Eng. & Systems 2019-11-11 Konstantinos Gatsis , George J. Pappas