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Related papers: Autocatalyses

200 papers

This paper is an invited layperson summary for The Academic of the paper referenced on the last page. We summarize how the formal framework of autocatalytic networks offers a means of modeling the origins of self-organizing, self-sustaining…

Artificial Intelligence · Computer Science 2024-07-17 Liane Gabora , Joscha Bach

Synthesis is the automatic construction of a system from its specification. In classical synthesis algorithms, it is always assumed that the system is "constructed from scratch" rather than composed from reusable components. This, of…

Logic in Computer Science · Computer Science 2015-07-01 Sumit Nain , Yoad Lustig , Moshe Y Vardi

Large-scale electrification is vital to addressing the climate crisis, but several scientific and technological challenges remain to fully electrify both the chemical industry and transportation. In both of these areas, new electrochemical…

Automata learning is a technique that has successfully been applied in verification, with the automaton type varying depending on the application domain. Adaptations of automata learning algorithms for increasingly complex types of automata…

Formal Languages and Automata Theory · Computer Science 2017-06-27 Gerco van Heerdt , Matteo Sammartino , Alexandra Silva

Every function on a finite set defines an equivalence relation and, therefore, a partition called the kernel of the function. Automata such that every possible partition is the kernel of a word are called totally compatible. A…

Formal Languages and Automata Theory · Computer Science 2021-10-12 David Fernando Casas Torres

Autophagy is a conserved biological stress response in mammalian cells that is responsible for clearing damaged proteins and organelles from the cytoplasm and recycling their contents via the lysosomal pathway. In cases of mild stress,…

Molecular Networks · Quantitative Biology 2015-05-11 I. Tavassoly , J. Parmar , A. N. Shajahan-Haq , R. Clarke , W. T. Baumann , J. J. Tyson

Nature has found one method of organizing living matter, but maybe other options exist -- not yet discovered -- on how to create life. To study the life "as it could be" is the objective of an interdisciplinary field called Artificial Life…

Neural and Evolutionary Computing · Computer Science 2021-10-06 Carlos Gershenson , Jitka Cejkova

Testing of autonomous systems is extremely important as many of them are both safety-critical and security-critical. The architecture and mechanism of such systems are fundamentally different from traditional control software, which appears…

Software Engineering · Computer Science 2021-03-15 Qunying Song , Emelie Engström , Per Runeson

The emergence of autocatalytic sets of molecules seems to have played an important role in the origin of life context. Although the possibility to reproduce this emergence in laboratory has received considerable attention, this is still far…

Adaptation and Self-Organizing Systems · Physics 2015-02-04 Alessandro Filisetti , Marco Villani , Chiara Damiani , Alex Graudenzi , Andrea Roli , Wim Hordijk , Roberto Serra

It is believed that thermodynamic laws are associated with random processes occurring in the system and, therefore, deterministic mechanical systems cannot be described within the framework of the thermodynamic approach. In this paper, we…

Classical Physics · Physics 2020-09-28 Sergey Rashkovskiy

Concept bottleneck models have been successfully used for explainable machine learning by encoding information within the model with a set of human-defined concepts. In the context of human-assisted or autonomous driving, explainability…

Computer Vision and Pattern Recognition · Computer Science 2023-10-27 Jessica Echterhoff , An Yan , Kyungtae Han , Amr Abdelraouf , Rohit Gupta , Julian McAuley

Controllability of chemical reactions is an important problem in chemical engineering science. In control theory, analysis of the controllability of linear systems is well-founded, however the dynamics of chemical reactions is usually…

Optimization and Control · Mathematics 2015-08-14 Dániel András Drexler , János Tóth

Robotic systems are multi-dimensional entities, combining both hardware and software, that are heavily dependent on, and influenced by, interactions with the real world. They can be variously categorised as embedded, cyberphysical,…

Software Engineering · Computer Science 2018-09-05 Marie Farrell , Matt Luckcuck , Michael Fisher

Self-organization can be broadly defined as the ability of a system to display ordered spatio-temporal patterns solely as the result of the interactions among the system components. Processes of this kind characterize both living and…

Adaptation and Self-Organizing Systems · Physics 2025-12-22 Carlos Gershenson , Vito Trianni , Justin Werfel , Hiroki Sayama

Experimental science is enabled by the combination of synthesis, imaging, and functional characterization. Synthesis of a new material is typically followed by a set of characterization methods aiming to provide feedback for optimization or…

The apparent difficulty of designing simple autocatalysts that grow exponentially in the absence of enzymes, external drives or ingenious internal mechanisms severely constrains scenarios for the emergence of evolution by natural selection…

Biomolecules · Quantitative Biology 2024-03-29 Yann Sakref , Olivier Rivoire

This two-part review examines how automation has contributed to different aspects of discovery in the chemical sciences. In this second part, we reflect on a selection of exemplary studies. It is increasingly important to articulate what…

Quantitative Methods · Quantitative Biology 2020-04-01 Connor W. Coley , Natalie S. Eyke , Klavs F. Jensen

It is shown that the independence of the continuum hypothesis points to the unique definite status of the set of intermediate cardinality: the intermediate set exists only as a subset of continuum. This latent status is a consequence of…

Quantum Physics · Physics 2007-05-23 O. Yaremchuk

We construct a simple model of a proto-cell that simulates a stochastic dynamics of abstract chemicals on a two-dimensional lattice. We assume that chemicals catalyze their reproduction through interaction with each other, and that between…

adap-org · Physics 2007-05-23 Naoaki Ono , Takashi Ikegami

We analyse the autocatalytic structure of technological networks and evaluate its significance for the dynamics of innovation patenting. To this aim, we define a directed network of technological fields based on the International Patents…

General Economics · Economics 2019-09-10 Lorenzo Napolitano , Evangelos Evangelou , Emanuele Pugliese , Paolo Zeppini , Graham Room