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Stochastic reaction networks are mathematical models with a wide range of applications in biochemistry, ecology, and epidemiology, and are often complex to analyze. Except for some special cases, it is generally difficult to predict how the…

Probability · Mathematics 2026-04-02 Daniele Cappelletti , Giulio Cuniberti , Paola Siri

Community ecology has traditionally relied on the competitive exclusion principle, a piece of common wisdom in conceptual frameworks developed to describe species assemblages. Key concepts in community ecology, such as limiting similarity…

Populations and Evolution · Quantitative Biology 2016-08-15 Jose A. Capitan , Sara Cuenda , David Alonso

A system of partial differential equations representing stochastic neural fields was recently proposed with the aim of modelling the activity of noisy grid cells when a mammal travels through physical space. The system was rigorously…

Analysis of PDEs · Mathematics 2023-07-18 José Antonio Carrillo , Pierre Roux , Susanne Solem

We introduce a mathematical model of savanna vegetation dynamics. The usual approach of nonequilibrium ecology is extended by including the impact of wet and dry seasons. We present and rigorously analyze a model describing a mixed…

Probability · Mathematics 2023-11-28 Paweł Klimasara , Marta Tyran-Kamińska

We present the main existence result for quasistatic crack growth in the model proposed by Dal Maso, Francfort, and Toader, and prove some qualitative properties of the solutions.

Functional Analysis · Mathematics 2008-08-19 Gianni Dal Maso , Alessandro Giacomini , Marcello Ponsiglione

Consider a birth and death chain to model the number of types of a given virus. Each type gives birth to a new type at rate $\lambda$ and dies at rate 1. Each type is also assigned a fitness. When a death occurs either the least fit type…

Probability · Mathematics 2013-06-29 J. T. Cox , R. B. Schinazi

Stochastic, spatially extended models for predator-prey interaction display spatio-temporal structures that are not captured by the Lotka-Volterra mean-field rate equations. These spreading activity fronts reflect persistent correlations…

Statistical Mechanics · Physics 2024-05-09 Uwe C. Täuber

Discrimination and calibration represent two important properties of survival analysis, with the former assessing the model's ability to accurately rank subjects and the latter evaluating the alignment of predicted outcomes with actual…

Machine Learning · Computer Science 2024-06-04 Shi-ang Qi , Yakun Yu , Russell Greiner

We study an individual-based predator-prey model of biological coevolution, using linear stability analysis and large-scale kinetic Monte Carlo simulations. The model exhibits approximate 1/f noise in diversity and population-size…

Populations and Evolution · Quantitative Biology 2007-06-13 Per Arne Rikvold , Volkan Sevim

Here, we consider an SIS epidemic model where the individuals are distributed on several distinct patches. We construct a stochastic model and then prove that it converges to a deterministic model as the total population size tends to…

Probability · Mathematics 2020-07-16 T. Yeo

Recently, the dynamical behaviors of a fractional order three species food chain model was studied by Alidousti and Ghahfarokhi ({\it Nonlinear Dynamics, doi: org/10.1007/s11071-018-4663-6, 2018}). They proved both the local and global…

Dynamical Systems · Mathematics 2019-05-28 Shuvojit Mondal , Nandadulal Bairagi , Gaston M. N'Guerekata

A model for large-scale evolution recently introduced by Amaral and Meyer is studied analytically and numerically. Species are located at different trophic levels and become extinct if their prey becomes extinct. It is proved that this…

adap-org · Physics 2009-10-30 Barbara Drossel

Stochastic fractionally dissipative quasi-geostrophic type equation on $R^d$ with a multiplicative Gaussian noise is considered. We prove the existence of a martingale solution. In the 2D sub-critical case we prove also the pathwise…

Probability · Mathematics 2017-02-10 Zdzislaw Brzezniak , Elżbieta Motyl

A wide variety of stochastic models of cladogenesis (based on speciation and extinction) lead to an identical distribution on phylogenetic tree shapes once the edge lengths are ignored. By contrast, the distribution of the tree's edge…

Populations and Evolution · Quantitative Biology 2024-11-05 Mike Steel

Stochastic models of diffusion with excluded-volume effects are used to model many biological and physical systems at a discrete level. The average properties of the population may be described by a continuum model based on partial…

Chemical Physics · Physics 2012-12-20 Maria Bruna , S. Jonathan Chapman

We analyze the long-term stability of a stochastic model designed to illustrate the adaptation of a population to variation in its environment. A piecewise-deterministic process modeling adaptation is coupled to a Feller logistic diffusion…

Probability · Mathematics 2021-09-14 Aurélien Velleret

We consider a hidden Markov model, where the signal process, given by a diffusion, is only indirectly observed through some noisy measurements. The article develops a variational method for approximating the hidden states of the signal…

Optimization and Control · Mathematics 2016-10-26 Tobias Sutter , Arnab Ganguly , Heinz Koeppl

We propose a residual randomization procedure designed for robust Lasso-based inference in the high-dimensional setting. Compared to earlier work that focuses on sub-Gaussian errors, the proposed procedure is designed to work robustly in…

Methodology · Statistics 2021-08-20 Y. Samuel Wang , Si Kai Lee , Panos Toulis , Mladen Kolar

This note reviews our mathematical models for fish schooling, considered in free space, and in space with obstacle and food resource. These models are performed by stochastic differential equations or stochastic partial differential…

Statistical Mechanics · Physics 2025-08-13 Linh Thi Hoai Nguyen , Ton Viet Ta , Atsushi Yagi

We investigate the formation of stable ecological networks where many species share the same resource. We show that such stable ecosystem naturally occurs as a result of extinctions. We obtain an analytical relation for the number of…

Populations and Evolution · Quantitative Biology 2017-04-05 V. Kozlov , S. Vakulenko , U. Wennergren
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