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In this work, we consider the reformulation of hierarchical ($\mathcal{H}$) matrix algorithms for many-core processors with a model implementation on graphics processing units (GPUs). $\mathcal{H}$ matrices approximate specific dense…

Distributed, Parallel, and Cluster Computing · Computer Science 2017-09-04 Peter Zaspel

The Density Matrix Renormalization Group (DMRG) algorithm is a powerful tool for solving eigenvalue problems to model quantum systems. DMRG relies on tensor contractions and dense linear algebra to compute properties of condensed matter…

Distributed, Parallel, and Cluster Computing · Computer Science 2021-01-26 Ryan Levy , Edgar Solomonik , Bryan K. Clark

To speed up Gaussian process inference, a number of fast kernel matrix-vector multiplication (MVM) approximation algorithms have been proposed over the years. In this paper, we establish an exact fast kernel MVM algorithm based on exact…

Machine Learning · Statistics 2025-08-05 Nicolas Langrené , Xavier Warin , Pierre Gruet

At the core of any inference procedure in deep neural networks are dot product operations, which are the component that require the highest computational resources. A common approach to reduce the cost of inference is to reduce its memory…

Machine Learning · Computer Science 2018-12-19 Simon Wiedemann , Klaus-Robert Müller , Wojciech Samek

Electronic structure calculations based on density-functional theory (DFT) represent a significant part of today's HPC workloads and pose high demands on high-performance computing resources. To perform these quantum-mechanical DFT…

Computational Physics · Physics 2021-04-28 Michael Lass , Robert Schade , Thomas D. Kühne , Christian Plessl

In this work, we introduce a highly efficient algorithm to address the nonnegative matrix underapproximation (NMU) problem, i.e., nonnegative matrix factorization (NMF) with an additional underapproximation constraint. NMU results are…

Computer Vision and Pattern Recognition · Computer Science 2017-04-11 Mariano Tepper , Guillermo Sapiro

A simple method for improving cache efficiency of serial and parallel explicit finite procedure with application to casting solidification simulation over three-dimensional complex geometries is presented. The method is based on division of…

Distributed, Parallel, and Cluster Computing · Computer Science 2010-05-19 Ruhollah Tavakoli

This article introduces a new fast direct solver for linear systems arising out of wide range of applications, integral equations, multivariate statistics, radial basis interpolation, etc., to name a few. \emph{The highlight of this new…

Numerical Analysis · Mathematics 2014-07-08 Sivaram Ambikasaran , Eric Darve

We propose a novel approach to iterated sparse matrix dense matrix multiplication, a fundamental computational kernel in scientific computing and graph neural network training. In cases where matrix sizes exceed the memory of a single…

Neural radiance field (NeRF) has shown remarkable performance in generating photo-realistic novel views. Among recent NeRF related research, the approaches that involve the utilization of explicit structures like grids to manage features…

Computer Vision and Pattern Recognition · Computer Science 2023-09-07 Yongjae Lee , Li Yang , Deliang Fan

An efficient decoding algorithm named `divided decoder' is proposed in this paper. Divided decoding can be combined with any decoder using QR-decomposition and offers different pairs of performance and complexity. Divided decoding provides…

Information Theory · Computer Science 2009-01-23 In Sook Park

We consider the numerical solution of large-scale M-matrix algebraic Riccati equations with low-rank structures. We derive a new doubling iteration, decoupling the four original iteration formulae in the alternating-directional doubling…

Numerical Analysis · Mathematics 2020-12-08 Zhen-Chen Guo , Eric King-wah Chu , Xin Liang

In this paper we present an efficient algorithm to compute the eigen decomposition of a matrix that is a weighted sum of the self outer products of vectors such as a covariance matrix of data. A well known algorithm to compute the eigen…

Numerical Analysis · Computer Science 2017-06-08 Youhei Akimoto

Multilinear and tensor decompositions are a popular tool in linear and multilinear algebra and have a wide range of important applications to modern computing. Our paper of 1972 presented the first nontrivial application of such…

Numerical Analysis · Computer Science 2014-11-10 Victor Y. Pan

A Random SubMatrix method (RSM) is proposed to calculate the low-rank decomposition of large-scale matrices with known entry percentage \rho. RSM is very fast as the floating-point operations (flops) required are compared favorably with the…

Numerical Analysis · Computer Science 2015-10-28 Yiguang Liu

The decomposition of a signal is a fundamental tool in many fields of research, including signal processing, geophysics, astrophysics, engineering, medicine, and many more. By breaking down complex signals into simpler oscillatory…

Numerical Analysis · Mathematics 2024-12-03 Roberto Cavassi , Antonio Cicone , Enza Pellegrino , Haomin Zhou

Many quantum algorithms for numerical linear algebra assume black-box access to a block-encoding of the matrix of interest, which is a strong assumption when the matrix is not sparse. Kernel matrices, which arise from discretizing a kernel…

Quantum Physics · Physics 2022-12-14 Quynh T. Nguyen , Bobak T. Kiani , Seth Lloyd

Graph Neural Networks (GNN) exhibit superior performance in graph representation learning, but their inference cost can be high, due to an aggregation operation that can require a memory fetch for a very large number of nodes. This…

Machine Learning · Computer Science 2025-03-18 Yaochen Hu , Mai Zeng , Ge Zhang , Pavel Rumiantsev , Liheng Ma , Yingxue Zhang , Mark Coates

The finite element method is a well-established method for the numerical solution of partial differential equations (PDEs), both linear and nonlinear. However, the repeated reassemblage of finite element matrices for nonlinear PDEs is…

Numerical Analysis · Mathematics 2022-09-12 Yannis Voet

We present a recursive way to partition hypergraphs which creates and exploits hypergraph geometry and is suitable for many-core parallel architectures. Such partitionings are then used to bring sparse matrices in a recursive Bordered Block…

Data Structures and Algorithms · Computer Science 2011-05-24 B. O. Fagginger Auer , R. H. Bisseling