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Cells are constantly exposed to fluctuating environmental conditions. External signals are sensed, processed and integrated by cellular signal transduction networks, which translate input signals into specific cellular responses by means of…

Molecular Networks · Quantitative Biology 2012-05-29 Pau Rué , Núria Domedel-Puig , Jordi Garcia-Ojalvo , Antonio J. Pons

Central pattern generators (CPGs) appear to have evolved multiple times throughout the animal kingdom, indicating that their design imparts a significant evolutionary advantage. Insight into how this design is achieved is hindered by the…

Biological Physics · Physics 2018-09-05 Eve Armstrong

Climate field reconstructions (CFR) attempt to estimate spatiotemporal fields of climate variables in the past using climate proxies such as tree rings, ice cores, and corals. Data Assimilation (DA) methods are a recent and promising new…

Methodology · Statistics 2020-08-06 Trevor Harris , Bo Li , Nathan Steiger , Jason Smerdon , Naveen Narisetty , Derek Tucker

Natural and artificial networks, from the cerebral cortex to large-scale power grids, face the challenge of converting noisy inputs into robust signals. The input fluctuations often exhibit complex yet statistically reproducible…

Adaptation and Self-Organizing Systems · Physics 2018-11-19 Henrik Ronellenfitsch , Jörn Dunkel , Michael Wilczek

The precise measurement of neutrino oscillation parameters is one of the highest priorities in neutrino oscillation physics. To achieve the desired precision, it is necessary to reduce the systematic uncertainties related to neutrino energy…

High Energy Physics - Phenomenology · Physics 2020-09-18 Srishti Nagu , Jaydip Singh , Jyotsna Singh

Radio interferometry is an observational technique used to study astrophysical phenomena. Data gathered by an interferometer requires substantial processing before astronomers can extract the scientific information from it. Data processing…

Instrumentation and Methods for Astrophysics · Physics 2024-12-24 Brian M. Kirk , Urvashi Rau , Ramyaa Ramyaa

Data assimilation (DA) aims to estimate the full state of a dynamical system by combining partial and noisy observations with a prior model forecast, commonly referred to as the background. In atmospheric applications, this problem is…

Atmospheric and Oceanic Physics · Physics 2025-05-29 Jing-An Sun , Hang Fan , Junchao Gong , Ben Fei , Kun Chen , Fenghua Ling , Wenlong Zhang , Wanghan Xu , Li Yan , Pierre Gentine , Lei Bai

Changes in a cell's external or internal conditions are usually reflected in the concentrations of the relevant transcription factors. These proteins in turn modulate the expression levels of the genes under their control and sometimes need…

Molecular Networks · Quantitative Biology 2013-08-01 Gasper Tkacik , Curtis G Callan , William Bialek

Instrument backgrounds at neutron scattering facilities directly affect the quality and the efficiency of the scientific measurements that users perform. Part of the background at pulsed spallation neutron sources is caused by, and…

We point out three apparent inconsistencies in the treatment of oscillation coherence from reactor neutrino and source neutrino experiments in recent paper "Damping of neutrino oscillations, decoherence and the lengths of neutrino wave…

High Energy Physics - Phenomenology · Physics 2022-09-02 B. J. P. Jones

Materials with bespoke properties have long been identified by computational searches, and their experimental realisation is now coming within reach through autonomous laboratories. Scattering experiments are central to verifying the atomic…

We present an improved method for handling off-shell effects in deep inelastic nuclear scattering. With a firm understanding of the effects of the nuclear wave function, including these off-shell corrections as well as binding and…

High Energy Physics - Phenomenology · Physics 2009-10-30 C. D. Cothran , D. B. Day , S. Liuti

The degrees of freedom associated with shape fluctuations and space orientation of atomic nuclei are analyzed with effective forces and large configuration spaces. A pedagogical theoretical introduction to the topic of symmetries…

Nuclear Theory · Physics 2017-01-25 J. L. Egido , L. M. Robledo

Methods for estimating the correlation energy of molecules and other electronic systems are discussed based on the assumption that the correlation energy can be partitioned between atomic regions. In one method, the electron density is…

Chemical Physics · Physics 2022-05-16 Jerry L. Whitten

We develop a technique for the multivariate data analysis of perturbed self-sustained oscillators. The approach is based on the reconstruction of the phase dynamics model from observations and on a subsequent exploration of this model. For…

Medical Physics · Physics 2019-06-03 M. Rosenblum , M. Frühwirth , M. Moser , A. Pikovsky

In this advanced instructional laboratory, students explore complex detection systems and nondestructive assay techniques used in the field of nuclear physics. After setting up and calibrating a neutron detection system, students carry out…

Physics Education · Physics 2023-08-15 Flynn B. Darby , Michael Y. Hua , Oskari V. Pakari , Shaun D. Clarke , Sara A. Pozzi

We assess the power consumption of network synchronisation protocols, particularly the energy required to synchronise all nodes across a network. We use the widely adopted approach of bio-inspired, pulse-coupled oscillators to achieve…

Distributed, Parallel, and Cluster Computing · Computer Science 2017-10-25 Paul Gainer , Sven Linker , Clare Dixon , Ullrich Hustadt , Michael Fisher

We compute nuclear spin dependent structure functions using a dynamical model for bound nucleon densities and hence calculate nuclear modifications to asymmetries observed in recent doubly polarised deep inelastic scattering experiments. We…

High Energy Physics - Phenomenology · Physics 2009-10-28 D. Indumathi

Transient X-ray absorption techniques can measure ultrafast dynamics of the elemental edges in a material or multiple layer junction, giving them immense potential for deconvoluting concurrent processes. However, the interpretation of the…

Materials Science · Physics 2021-06-10 Hanzhe Liu , Isabel M. Klein , Jonathan M. Michelsen , Scott K. Cushing

We consider quantum-decoherence effects in neutrino oscillation data. Working in the open quantum system framework we adopt a phenomenological approach that allows to parameterize the energy dependence of the decoherence effects. We…

High Energy Physics - Phenomenology · Physics 2023-09-19 Valentina De Romeri , Carlo Giunti , Thomas Stuttard , Christoph A. Ternes
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