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Node-link diagrams are widely used to visualize graphs. Most graph layout algorithms only use graph topology for aesthetic goals (e.g., minimize node occlusions and edge crossings) or use node attributes for exploration goals (e.g.,…

Data Structures and Algorithms · Computer Science 2023-01-20 Leixian Shen , Zhiwei Tai , Enya Shen , Jianmin Wang

Graph Transformers (GTs) have made remarkable achievements in graph-level tasks. However, most existing works regard graph structures as a form of guidance or bias for enhancing node representations, which focuses on node-central…

Machine Learning · Computer Science 2024-12-10 Xiaorui Qi , Qijie Bai , Yanlong Wen , Haiwei Zhang , Xiaojie Yuan

Given the prevalence of large-scale graphs in real-world applications, the storage and time for training neural models have raised increasing concerns. To alleviate the concerns, we propose and study the problem of graph condensation for…

Machine Learning · Computer Science 2022-09-29 Wei Jin , Lingxiao Zhao , Shichang Zhang , Yozen Liu , Jiliang Tang , Neil Shah

In network tomography, one goal is to identify a small set of failed links in a network, by sending a few packets through the network and seeing which reach their destination. This problem can be seen as a variant of combinatorial group…

Information Theory · Computer Science 2018-09-12 Bruce Spang , Mary Wootters

Finding large "cliquish" subgraphs is a central topic in graph mining and community detection. A popular clique relaxation are 2-clubs: instead of asking for subgraphs of diameter one (these are cliques), one asks for subgraphs of diameter…

Data Structures and Algorithms · Computer Science 2018-12-24 Christian Komusiewicz , André Nichterlein , Rolf Niedermeier , Marten Picker

Compression of inverted lists with methods that support fast intersection operations is an active research topic. Most compression schemes rely on encoding differences between consecutive positions with techniques that favor small numbers.…

Information Retrieval · Computer Science 2009-11-18 Francisco Claude , Antonio Farina , Gonzalo Navarro

We propose a method for demonstrating sub community structure in scientific networks of relatively small size from analyzing databases of publications. Research relationships between the network members can be visualized as a graph with…

Social and Information Networks · Computer Science 2017-05-05 Steven B. Bradlow , Konstantinos Kapenekakis , Georgios Kydonakis , Xinwei Li , Jiarui Xu

In this paper, we show a connection between a certain online low-congestion routing problem and an online prediction of graph labeling. More specifically, we prove that if there exists a routing scheme that guarantees a congestion of…

Data Structures and Algorithms · Computer Science 2008-09-12 Jittat Fakcharoenphol , Boonserm Kijsirikul

We study hypergraph visualization via its topological simplification. We explore both vertex simplification and hyperedge simplification of hypergraphs using tools from topological data analysis. In particular, we transform a hypergraph to…

Human-Computer Interaction · Computer Science 2021-04-23 Youjia Zhou , Archit Rathore , Emilie Purvine , Bei Wang

We associate all small subgraph counting problems with a systematic graph encoding/representation system which makes a coherent use of graphlet structures. The system can serve as a unified foundation for studying and connecting many…

Discrete Mathematics · Computer Science 2021-03-22 Dimitris Floros , Nikos Pitsianis , Xiaobai Sun

Graph theory is increasingly commonly utilised in genetics, proteomics and neuroimaging. In such fields, the data of interest generally constitute weighted graphs. Analysis of such weighted graphs often require the integration of…

Molecular Networks · Quantitative Biology 2011-06-09 Cedric E. Ginestet , Andrew Simmons

Network alignment is useful for multiple applications that require increasingly large graphs to be processed. Existing research approaches this as an optimization problem or computes the similarity based on node representations. However,…

Social and Information Networks · Computer Science 2020-08-03 Kyle K. Qin , Flora D. Salim , Yongli Ren , Wei Shao , Mark Heimann , Danai Koutra

The problem of finding dense components of a graph is a widely explored area in data analysis, with diverse applications in fields and branches of study including community mining, spam detection, computer security and bioinformatics. This…

Information Retrieval · Computer Science 2021-03-02 B. D. M. De Zoysa , Y. A. M. M. A. Ali , M. D. I. Maduranga , Indika Perera , Saliya Ekanayake , Anil Vullikanti

With the proliferation of large irregular sparse relational datasets, new storage and analysis platforms have arisen to fill gaps in performance and capability left by conventional approaches built on traditional database technologies and…

Databases · Computer Science 2013-09-12 Rob McColl , David Ediger , Jason Poovey , Dan Campbell , David Bader

Modeling networks as different graph types and researching on route finding strategies, to avoid congestion in dense subnetworks via graph-theoretic approaches, contributes to overall blocking probability reduction in networks. Our main…

Networking and Internet Architecture · Computer Science 2021-03-12 Zohre R. Mojaveri , András Faragó

Graph clustering (or community detection) has long drawn enormous attention from the research on web mining and information networks. Recent literature on this topic has reached a consensus that node contents and link structures should be…

Social and Information Networks · Computer Science 2017-12-25 Carl Yang , Mengxiong Liu , Zongyi Wang , Liyuan Liu , Jiawei Han

Increasing the connectivity of a graph is a pivotal challenge in robust network design. The weighted connectivity augmentation problem is a common version of the problem that takes link costs into consideration. The problem is then to find…

Data Structures and Algorithms · Computer Science 2024-02-13 Marcelo Fonseca Faraj , Ernestine Großmann , Felix Joos , Thomas Möller , Christian Schulz

Dynamics on and of networks refer to changes in topology and node-associated signals, respectively and are pervasive in many socio-technological systems, including social, biological, and infrastructure networks. Due to practical…

Signal Processing · Electrical Eng. & Systems 2025-06-11 Bishwadeep Das , Andrei Buciulea , Antonio G. Marques , Elvin Isufi

In this work, we establish theoretical and practical connections between vertex indexing for sparse graph/network compression and matrix ordering for sparse matrix-vector multiplication and variable elimination. We present a fundamental…

Data Structures and Algorithms · Computer Science 2024-10-01 Dimitris Floros , Nikos Pitsianis , Xiaobai Sun

We present a one-shot method for compressing large labeled graphs called Random Edge Coding. When paired with a parameter-free model based on P\'olya's Urn, the worst-case computational and memory complexities scale quasi-linearly and…

Machine Learning · Computer Science 2023-05-18 Daniel Severo , James Townsend , Ashish Khisti , Alireza Makhzani