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With unprecedented advances in genetic engineering we are starting to see progressively more original examples of synthetic life. As such organisms become more common it is desirable to be able to distinguish between natural and artificial…

Other Computer Science · Computer Science 2016-11-28 Roman V. Yampolskiy

Darwin's hypothesis that all extant life forms are descendants of a last common ancestor cell and diversification of life forms results from gradual mutation plus natural selection represents a mainstream view that has influenced biology…

Populations and Evolution · Quantitative Biology 2008-12-13 Shi V. Liu

A simple model of species origin resulted from dynamic features of a population, solely, is developed. The model is based on the evolution optimality in space distribution, and the selection is gone over the mobility. Some biological issues…

Populations and Evolution · Quantitative Biology 2008-04-25 Michael G. Sadovsky

Darwin's theory of evolution is considered to be one of the greatest scientific gems in modern science. It not only gives us a description of how living things evolve, but also shows how a population evolves through time and also, why only…

Machine Learning · Computer Science 2013-12-18 Arka Bhattacharya

From 1837, when he returned to England aboard the $\textit{HMS Beagle}$, to 1860, just after publication of $\textit{The Origin of Species}$, Charles Darwin kept detailed notes of each book he read or wanted to read. His notes and…

Computation and Language · Computer Science 2018-02-28 Jaimie Murdock , Colin Allen , Simon DeDeo

The idea that all life on earth traces back to a common beginning dates back at least to Charles Darwin's {\em Origin of Species}. Ever since, biologists have tried to piece together parts of this `tree of life' based on what we can observe…

Populations and Evolution · Quantitative Biology 2014-02-18 Mike Steel

Although Darwinian models are rampant in the social sciences, social scientists do not face the problem that motivated Darwin's theory of natural selection: the problem of explaining how lineages evolve despite that any traits they acquire…

Populations and Evolution · Quantitative Biology 2019-07-09 Liane Gabora

The problem of the rate and mechanisms of biological evolution was considered. It was shown that species could not be formed due to undirected mutations in characteristic times of about one million years. A mechanism of deterministic…

Populations and Evolution · Quantitative Biology 2007-05-23 Alexey V. Melkikh

It is usually believed that Darwin's theory leads to a smooth gradual evolution, so that mass extinctions must be caused by external shocks. However, it has recently been argued that mass extinctions arise from the intrinsic dynamics of…

Condensed Matter · Physics 2015-06-25 Per Bak , Maya Paczuski

The theory of evolution by natural selection cannot be used to evaluate the truth value of the following proposition: Through evolution, there exists at least one species that can adapt to any one given environment. To address this issue,…

Biological Physics · Physics 2022-08-17 Kai Xu

Jerry Fodor argues that Darwin was wrong about "natural selection" because (1) it is only a tautology rather than a scientific law that can support counterfactuals ("If X had happened, Y would have happened") and because (2) only minds can…

Neural and Evolutionary Computing · Computer Science 2009-09-30 Stevan Harnad

Bayesian methods since the time of Laplace have been understood by their practitioners as closely aligned to the scientific method. Indeed a recent champion of Bayesian methods, E. T. Jaynes, titled his textbook on the subject Probability…

General Physics · Physics 2010-01-05 John Campbell

"Evidence and Evolution: the Logic behind the Science" was published in 2008 by Elliott Sober. It examines the philosophical foundations of the statistical arguments used to evaluate hypotheses in evolutionary biology, based on simple…

Methodology · Statistics 2010-06-23 Christian P. Robert

Darwin claims in the {\em Origin} that similarity is evidence for common ancestry, but that adaptive similarities are "almost valueless" as evidence. This claim seems reasonable for some adaptive similarities but not for others. Here we…

Populations and Evolution · Quantitative Biology 2015-01-21 Elliott Sober , Mike Steel

In the spirit of the many recent simple models of evolution inspired by statistical physics, we put forward a simple model of the evolution of such models. Like its objects of study, it is (one supposes) in principle testable and capable of…

adap-org · Physics 2007-05-23 Cosma Rohilla Shalizi , William A. Tozier

Life forms exhibit such a degree of exquisite organization that it seems impossible that they could have developed out of a process of trial and error, as intimated by the theory of Darwinian evolution. In this general public paper I…

Populations and Evolution · Quantitative Biology 2019-01-08 Luca Peliti

Instructive influence of environment on heredity has been a debated topic for centuries. Darwin's identification of natural selection coupled to chance variation as the driving force for evolution, against a formal interpretation proposed…

Genomics · Quantitative Biology 2007-05-23 Antoine Danchin

Culture evolves, not just in the trivial sense that cultures change over time, but also in the strong sense that such change is governed by Darwinian principles. Both biological and cultural evolution are essentially cumulative selection…

Populations and Evolution · Quantitative Biology 2016-09-16 Chris Buskes

The inheritance of characteristics induced by the environment has often been opposed to the theory of evolution by natural selection. Yet, while evolution by natural selection requires new heritable traits to be produced and transmitted, it…

Populations and Evolution · Quantitative Biology 2015-06-18 Olivier Rivoire , Stanislas Leibler

Our understanding of the evolutionary process has gone a long way since the publication, 150 years ago, of "On the origin of species" by Charles R. Darwin. The XXth Century witnessed great efforts to embrace replication, mutation, and…

Populations and Evolution · Quantitative Biology 2012-02-02 Susanna C. Manrubia , Jose A. Cuesta
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