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DNA as a data storage medium has several advantages, including far greater data density compared to electronic media. We propose that schemes for data storage in the DNA of living organisms may benefit from studying the reconstruction…

Information Theory · Computer Science 2019-09-10 Yonatan Yehezkeally , Moshe Schwartz

Common problem in signal processing is reconstruction of the missing signal samples. Missing samples can occur by intentionally omitting signal coefficients to reduce memory requirements, or to speed up the transmission process. Also, noisy…

Information Theory · Computer Science 2015-03-02 Slavoljub Jokić , Ljindita Niković , Jelena Kadović

Motivated by studies of data retrieval in polymer-based storage systems, we consider the problem of reconstructing a multiset of binary strings that have the same length and the same weight from the compositions of their prefixes and…

Discrete Mathematics · Computer Science 2024-11-07 Yaoyu Yang , Zitan Chen

Reconciliation is a mechanism allowing to weed out the discrepancies between two correlated variables. It has great role in every Quantum Key Distribution protocol where the key has to be transmitted through a noisy channel or as in our…

Cryptography and Security · Computer Science 2020-02-20 Nedra Benletaief , Houria Rezig , Ammar Bouallegue

We present methods for conditional and residual coding in the context of scalable coding for humans and machines. Our focus is on optimizing the rate-distortion performance of the reconstruction task using the information available in the…

Image and Video Processing · Electrical Eng. & Systems 2023-07-06 Anderson de Andrade , Alon Harell , Yalda Foroutan , Ivan V. Bajić

In this paper, we tackle the compressive phase retrieval problem in the presence of noise. The noisy compressive phase retrieval problem is to recover a $K$-sparse complex signal $s \in \mathbb{C}^n$, from a set of $m$ noisy quadratic…

Information Theory · Computer Science 2016-06-03 Dong Yin , Kangwook Lee , Ramtin Pedarsani , Kannan Ramchandran

We propose a new method for reconstruction of sparse signals with and without noisy perturbations, termed the subspace pursuit algorithm. The algorithm has two important characteristics: low computational complexity, comparable to that of…

Numerical Analysis · Computer Science 2009-01-08 Wei Dai , Olgica Milenkovic

Hyperspectral neutron computed tomography enables 3D non-destructive imaging of the spectral characteristics of materials. In traditional hyperspectral reconstruction, the data for each neutron wavelength bin is reconstructed separately.…

We consider signal reconstruction from the norms of subspace components generalizing standard phase retrieval problems. In the deterministic setting, a closed reconstruction formula is derived when the subspaces satisfy certain cubature…

Probability · Mathematics 2017-09-04 Christine Bachoc , Martin Ehler

We investigate the problem of decoding a bar code from a signal measured with a hand-held laser-based scanner. Rather than formulating the inverse problem as one of binary image reconstruction, we instead incorporate the symbology of the…

Numerical Analysis · Mathematics 2012-10-29 Mark Iwen , Fadil Santosa , Rachel Ward

We present a new method for large language models to solve compositional tasks. Although they have shown strong performance on traditional language understanding tasks, large language models struggle to solve compositional tasks, where the…

Computation and Language · Computer Science 2024-07-09 Eric Pasewark , Kyle Montgomery , Kefei Duan , Dawn Song , Chenguang Wang

The problem of reconstructing strings from substring information has found many applications due to its importance in genomic data sequencing and DNA- and polymer-based data storage. One practically important and challenging paradigm…

Information Theory · Computer Science 2021-10-07 Ryan Gabrys , Srilakshmi Pattabiraman , Olgica Milenkovic

In ground based infrared imaging a well-known technique to reduce the influence of thermal and background noise is chopping and nodding, where four different signals of the same object are recorded from which the object is reconstructed…

Astrophysics · Physics 2009-11-11 Frank Lenzen , Otmar Scherzer , Sabine Schindler

Video compression systems must support increasing bandwidth and data throughput at low cost and power, and can be limited by entropy coding bottlenecks. Efficiency can be greatly improved by parallelizing coding, which can be done at much…

Image and Video Processing · Electrical Eng. & Systems 2023-12-05 Amir Said , Hoang Le , Farzad Farhadzadeh

In Compressed Sensing, a real-valued sparse vector has to be recovered from an underdetermined system of linear equations. In many applications, however, the elements of the sparse vector are drawn from a finite set. Adapted algorithms…

Information Theory · Computer Science 2017-03-03 Susanne Sparrer , Robert F. H. Fischer

This paper studies reconstruction of strings based upon their substrings spectrum. Under this paradigm, it is assumed that all substrings of some fixed length are received and the goal is to reconstruct the string. While many existing works…

Information Theory · Computer Science 2021-06-02 Sagi Marcovich , Eitan Yaakobi

Motivated by DNA-based storage applications, we study the problem of reconstructing a coded sequence from multiple traces. We consider the model where the traces are outputs of independent deletion channels, where each channel deletes each…

Information Theory · Computer Science 2022-07-13 Serge Kas Hanna

For high throughput applications, turbo-like iterative decoders are implemented with parallel architectures. However, to be efficient parallel architectures require to avoid collision accesses i.e. concurrent read/write accesses should not…

Hardware Architecture · Computer Science 2010-02-23 Cyrille Chavet , Philippe Coussy , Eric Martin , Pascal Urard

We derive a method to reconstruct Gaussian signals from linear measurements with Gaussian noise. This new algorithm is intended for applications in astrophysics and other sciences. The starting point of our considerations is the principle…

Instrumentation and Methods for Astrophysics · Physics 2011-10-18 Niels Oppermann , Georg Robbers , Torsten A. Ensslin

This work proposes a general framework for the design and simulation of network on chip based turbo decoder architectures. Several parameters in the design space are investigated, namely the network topology, the parallelism degree, the…

Hardware Architecture · Computer Science 2016-11-18 Maurizio Martina , Guido Masera