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Related papers: Cosmological Simulations on a Grid of Computers

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This is the first paper of a series that describes the methods and basic results of the GalICS model (for Galaxies In Cosmological Simulations). GalICS is a hybrid model for hierarchical galaxy formation studies, combining the outputs of…

The advent of new sub-millimeter observational facilities has stimulated the desire to model the sub-mm line emission of galaxies within cosmological galaxy formation models. This is typically done in post-processing by applying…

Astrophysics of Galaxies · Physics 2018-11-14 Gergö Popping , Desika Narayanan , Rachel S. Somerville , Andreas L. Faisst , Mark R. Krumholz

We seek to understand the relationship between galaxy properties and their local environment, which calls for a proper formulation of the notion of environment. We analyse the GIMIC suite of cosmological hydrodynamical simulations within…

Astrophysics of Galaxies · Physics 2015-06-19 Ofer Metuki , Noam I. Libeskind , Yehuda Hoffman , Robert A. Crain , Tom Theuns

This paper discusses the latest generation of the MONARC (MOdels of Networked Analysis at Regional Centers) simulation framework, as a design and modeling tool for large scale distributed systems applied to HEP experiments. The simulation…

Distributed, Parallel, and Cluster Computing · Computer Science 2011-06-28 Iosif Legrand , Ciprian Dobre , Ramiro Voicu , Corina Stratan , Catalin Cirstoiu , Lucian Musat

We apply a novel method with machine learning to calibrate sub-grid models within numerical simulation codes to achieve convergence with observations and between different codes. It utilizes active learning and neural density estimators.…

Astrophysics of Galaxies · Physics 2022-10-07 Boon Kiat Oh , Hongjun An , Eun-jin Shin , Ji-hoon Kim , Sungwook E. Hong

We address the problem of identifying remnants of satellite galaxies in the halo of our galaxy with Gaia data. We make use of N-body simulations of dwarf galaxies being disrupted in the halo of our galaxy combined with a Monte Carlo model…

Astrophysics · Physics 2007-05-23 Anthony Brown , Hector Velazquez , Luis Aguilar

Simulation based inference has seen increasing interest in the past few years as a promising approach to model the non linear scales of galaxy clustering. The common approach using Gaussian process is to train an emulator over the…

Cosmology and Nongalactic Astrophysics · Physics 2023-11-20 Tyann Dumerchat , Julian Bautista

GROMACS is one of the most widely used HPC software packages using the Molecular Dynamics (MD) simulation technique. In this work, we quantify GROMACS parallel performance using different configurations, HPC systems, and FFT libraries…

Computational Physics · Physics 2023-08-02 Måns I. Andersson , N. Arul Murugan , Artur Podobas , Stefano Markidis

Simulation of post-prandial pharmacokinetics, such as muscle protein synthesis (MPS) through mTORC1 and insulin-induced glucose uptake, is often challenging due to the computational intensity of the multi-compartmental approach. In this…

Other Quantitative Biology · Quantitative Biology 2026-05-28 Alberto Calderone

Numerical simulation plays an important role in the study of structure formation of the universe. However, the mass resolution in current simulations is still poor. Due to technical difficulties, it is necessary to use both greatly reduced…

Astrophysics · Physics 2009-11-10 Weike Xiao , Zhengfan Sun , Heng Hao

We use the Millennium Simulation, a 10 billion particle simulation of the growth of cosmic structure, to construct a new model of galaxy clustering. We adopt a methodology that falls midway between the traditional semi-analytic approach and…

Astrophysics · Physics 2009-11-11 Lan Wang , Cheng Li , Guinevere Kauffmann , Gabriella De Lucia

This paper is the third in a series on submillimeter galaxy magnification bias, focusing on the tomographic scenario. It refines the methodology used to constrain the halo occupation distribution model and cosmological parameters within a…

Cosmology and Nongalactic Astrophysics · Physics 2024-06-12 L. Bonavera , M. M. Cueli , J. González-Nuevo , J. M. Casas , D. Crespo

With large-scale Integral Field Spectroscopy (IFS) surveys of thousands of galaxies currently under-way or planned, the astronomical community is in need of methods, techniques and tools that will allow the analysis of huge amounts of data.…

Instrumentation and Methods for Astrophysics · Physics 2015-12-22 Georgios Bekiaris , Karl Glazebrook , Christopher J. Fluke , Roberto Abraham

MiMiC is a framework for performing multiscale simulations in which loosely coupled external programs describe individual subsystems at different resolutions and levels of theory. To make it highly efficient and flexible, we adopt an…

We present a novel simulation-based hybrid emulator approach that maximally derives cosmological and Halo Occupation Distribution (HOD) information from non-linear galaxy clustering, with sufficient precision for DESI Year 1 (Y1) analysis.…

Cosmology and Nongalactic Astrophysics · Physics 2022-07-20 Sihan Yuan , Lehman H. Garrison , Daniel J. Eisenstein , Risa H. Wechsler

We explore the circumgalactic medium (CGM) of two simulated star-forming galaxies with luminosities L ~ 0.1 and 1 L* generated using the smooth particle hydrodynamic code GASOLINE. These simulations are part of the Making Galaxies In a…

We introduced a semi-analytic model to study the detail of radial related processes on galaxy disks. Based on this recipe, we can calculate neutral and molecular gas in interstellar medium, and include the molecular phase into star…

Cosmology and Nongalactic Astrophysics · Physics 2015-05-18 Jian Fu , Qi Guo , Guinevere Kauffmann

The molecular dynamics simulation package GROMACS runs efficiently on a wide variety of hardware from commodity workstations to high performance computing clusters. Hardware features are well exploited with a combination of SIMD,…

Distributed, Parallel, and Cluster Computing · Computer Science 2019-03-14 Carsten Kutzner , Szilárd Páll , Martin Fechner , Ansgar Esztermann , Bert L. de Groot , Helmut Grubmüller

Deep learning models have been shown to outperform methods that rely on summary statistics, like the power spectrum, in extracting information from complex cosmological data sets. However, due to differences in the subgrid physics…

Cosmology and Nongalactic Astrophysics · Physics 2024-04-16 Andrea Roncoli , Aleksandra Ćiprijanović , Maggie Voetberg , Francisco Villaescusa-Navarro , Brian Nord

Simulations inform all aspects of modern astrophysical research, ranging in scale from 1D and 2D test problems that can run in seconds on an astronomer's laptop all the way to large-scale 3D calculations that run on the largest…

Instrumentation and Methods for Astrophysics · Physics 2017-11-29 Nathan J Goldbaum