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Decision-making is the process of selecting an action among alternatives, allowing biological and artificial systems to navigate complex environments and optimize behavior. While neural systems rely on neuron-based sensory processing and…

Biological Physics · Physics 2025-06-17 Lisa Schick , Emily Eichenlaub , Fabian Drexel , Alexander Mayer , Siyu Chen , Marcus Roper , Karen Alim

Information processing and decision making is based upon logic operations, which in cellular networks has been well characterized at the level of transcription. In recent years however, both experimentalists and theorists have begun to…

Molecular Networks · Quantitative Biology 2012-09-11 Wiet de Ronde , Pieter Rein ten Wolde , Andrew Mugler

Non-von Neumann computational hardware, based on neuron-inspired, non-linear elements connected via linear, weighted synapses -- so-called neuromorphic systems -- is a viable computational substrate. Since neuromorphic systems have been…

Neurons and Cognition · Quantitative Biology 2021-03-17 Oleksandr Iaroshenko , Andrew T. Sornborger

Using symmetry considerations, we derive a unitary scattering matrix for a three-port optical Y-coupler or Y-branch. The result is shown to be unique up to external phase shifts. Unlike traditional passive linear-optical one-way splitters,…

We have previously discussed the design of a neutral atom quantum computer with an on-demand interaction [E. Hosseini Lapasar, et al., J. Phys. Soc. Jpn. 80, 114003 (2011)]. In this contribution, we propose an experimental method to…

We experimentally demonstrate a hybrid reservoir computing system consisting of an electro-optic modulator and field programmable gate array (FPGA). It implements delay lines and filters digitally for flexible dynamics and high…

Signal Processing · Electrical Eng. & Systems 2021-02-19 Prajnesh Kumar , Mingwei Jin , Ting Bu , Santosh Kumar , Yu-Ping Huang

Solid-state nanopore gating inspired by biological ion channels is gaining increasing traction due to a large range of applications in biosensing and drug delivery. Integration of stimuli-responsive molecules such as…

Qudit-based quantum gates offer several advantages over qubit-based counterparts, such as higher information density, the ability to address more complex problems, and richer quantum operations. In this paper, we present three realistic…

Quantum Physics · Physics 2025-05-15 Zhi-Guo Fan , Zhuo-Ya Bai , Qiu-Lin Tan , Fang-Fang Du

We demonstrate single-qubit operations by transporting a beryllium ion with a controlled velocity through a stationary laser beam. We use these to perform coherent sequences of quantum operations, and to perform parallel quantum logic gates…

A fluidic one-bit half-adder is made of five channels which intersect at a junction. Two channels are inputs, two channels are outputs and one channel is the drain. The channels direct fluid from input fragments to output fragments and the…

Emerging Technologies · Computer Science 2016-02-03 Alex J. L. Morgan , David A. Barrow , Andrew Adamatzky , Martin M. Hanczyc

Exterior calculus with its three operations meet, join and hodge star complement, is used for the representation of fermion-hole systems and for fermionic analogues of logical gates. Two different schemes that implement fermionic quantum…

Quantum Physics · Physics 2018-11-14 A. Vourdas

Reversible computation has been proposed as a future paradigm for energy efficient computation, but so far few implementations have been realised in practice. Quantum circuits, running on quantum computers, are one construct known to be…

An information processing circuit must be flexible to perform multiple tasks: biochemical information processing circuits in living systems can have multiple functions, requiring them to perform distinct computational tasks in different…

Molecular Networks · Quantitative Biology 2021-11-30 Mohammadreza Bahadorian , Carl D. Modes

Holographic algorithms, alternatively known as Pfaffian circuits, have received a great deal of attention for giving polynomial-time algorithms of $\#\mathsf{P}$-hard problems. Much work has been done to determine the extent of what this…

Algebraic Geometry · Mathematics 2017-05-16 Jacob Turner

Computations with a future quantum computer will be implemented through the operations by elementary quantum gates. It is now well known that the collection of 1-bit and 2-bit quantum gates are universal for quantum computation, i.e., any…

Quantum Physics · Physics 2007-05-23 G. Chen , D. A. Church , B. -G. Englert , M. S. Zubairy

It is the first step for understanding how RNA structure folds from base sequences that to know how its secondary structure is formed. Traditional energy-based algorithms are short of precision, particularly for non-nested sequences, while…

Quantum Physics · Physics 2023-05-18 Ji Jiang , Qipeng Yan , Ye Li , Min Lu , Ziwei Cui , Menghan Dou , Qingchun Wang , Yu-Chun Wu , Guo-Ping Guo

Interferences in multi-path systems for single and multiple particles are theoretically analyzed. A holistic method is presented, which allows to construct the unitary transition matrix describing interferometers for any port number d and…

Quantum Physics · Physics 2019-12-10 Bülent Demirel

Quantum computation is a continuously growing research area which is based on nature and resources of quantum mechanics, as superposition and entanglement. In its quantum circuits version, the use of convenient and appropriate gates is…

Quantum Physics · Physics 2016-11-04 Francisco Delgado

We exactly construct one- and two-qubit holonomic quantum gates in terms of isospectral deformations of an Ising model Hamiltonian. A single logical qubit is constructed out of two spin-1/2 particles; the qubit is a dimer. We find that the…

Quantum Physics · Physics 2008-11-11 Yukihiro Ota , Masamitsu Bando , Yasusi Kondo , Mikio Nakahara

Bio-digital systems that merge microbial life with technology promise new modes of computation, combining biological adaptability with digital precision. Yet realizing this potential symbiotically -- where biological and digital agents…

Human-Computer Interaction · Computer Science 2026-01-23 Zoë Breed , Elvin Karana , Alessandro Bozzon , Katherine W. Song