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Trophic coherence, a measure of the extent to which the nodes of a directed network are organised in levels, has recently been shown to be closely related to many structural and dynamical aspects of complex systems, including graph…

Physics and Society · Physics 2016-07-22 Janis Klaise , Samuel Johnson

A one species time-delay reaction-diffusion system defined on a complex networks is studied. Travelling waves are predicted to occur as follows a symmetry breaking instability of an homogenous stationary stable solution, subject to an…

Statistical Mechanics · Physics 2015-09-30 Julien Petit , Timoteo Carletti , Mabor Asslani , Duccio Fanelli

Traveling fronts and stationary localized patterns in bistable reaction-diffusion systems have been broadly studied for classical continuous media and regular lattices. Analogs of such non-equilibrium patterns are also possible in networks.…

Pattern Formation and Solitons · Physics 2012-10-29 Nikos E. Kouvaris , Hiroshi Kori , Alexander S. Mikhailov

The biopolymers actin and microtubules are often in an ongoing assembling/disassembling state far from thermal equilibrium. Above a critical density this leads to spatially periodic patterns, as shown by a scaling argument and in terms of a…

Soft Condensed Matter · Physics 2007-05-23 Falko Ziebert , Walter Zimmermann

Models of diffusion driven pattern formation that rely on the Turing mechanism are utilized in many areas of science. However, many such models suffer from the defect of requiring fine tuning of parameters or an unrealistic separation of…

Other Quantitative Biology · Quantitative Biology 2015-03-17 Thomas Butler , Nigel Goldenfeld

Turing instabilities of reaction-diffusion systems can only arise if the diffusivities of the chemical species are sufficiently different. This threshold is unphysical in most systems with $N=2$ diffusing species, forcing experimental…

Soft Condensed Matter · Physics 2026-03-17 Pierre A. Haas , Raymond E. Goldstein

Identifying and explaining the structure of complex networks at different scales has become an important problem across disciplines. At the mesoscale, modular architecture has attracted most of the attention. At the macroscale, other…

Physics and Society · Physics 2018-11-09 María J. Palazzi , Javier Borge-Holthoefer , Claudio Tessone , Albert Solé-Ribalta

Turing presented a general representation scheme by which to achieve artificial intelligence - unorganised machines. Significantly, these were a form of discrete dynamical system and yet such representations remain relatively unexplored.…

Emerging Technologies · Computer Science 2012-12-07 Larry Bull , Julian Holley , Ben De Lacy Costello , Andrew Adamatzky

We analyze pattern formation on a network of cells where each cell inhibits its neighbors through cell-to-cell contact signaling. The network is modeled as an interconnection of identical dynamical subsystems each of which represents the…

Dynamical Systems · Mathematics 2014-07-25 Ana S. Rufino Ferreira , Murat Arcak

In a manner similar to the molecular chaos that underlies the stable thermodynamics of gases, neuronal system may exhibit microscopic instability in individual neuronal dynamics while a macroscopic order of the entire population possibly…

Neurons and Cognition · Quantitative Biology 2015-06-23 Yuzuru Yamanaka , Shun-ichi Amari , Shigeru Shinomoto

Synchrony patterns describe network states in which nodes of a coupled dynamical system are grouped into clusters based on synchronization between nodes. Beyond simple synchrony, synchronized clusters may also exhibit active or inactive…

Adaptation and Self-Organizing Systems · Physics 2026-03-12 Anil Kumar , V. K. Chandrasekar , D. V. Senthilkumar

Spatial self-organization emerges in distributed systems exhibiting local interactions when nonlinearities and the appropriate propagation of signals are at work. These kinds of phenomena can be modeled with different frameworks, typically…

Cell Behavior · Quantitative Biology 2016-11-23 Adriano Bonforti , Salva Duran-Nebreda , Raul Montañez , Ricard Solé

The activity generated by an ensemble of neurons is affected by various noise sources. It is a well-recognised challenge to understand the effects of noise on the stability of such networks. We demonstrate that the patterns of activity…

Analysis of PDEs · Mathematics 2022-05-19 Jose A. Carrillo , Helge Holden , Susanne Solem

Biological functions rely on ordered structures and intricately controlled collective dynamics. In contrast to systems in thermodynamic equilibrium, order is typically established and sustained in stationary states by continuous dissipation…

We study pattern formation in class of a large-dimensional neural networks posed on random graphs and subject to spatio-temporal stochastic forcing. Under generic conditions on coupling and nodal dynamics, we prove that the network admits a…

Probability · Mathematics 2025-08-26 Daniele Avitabile , James MacLaurin

Non-equilibrium systems lack an explicit characterisation of their steady state like the Boltzmann distribution for equilibrium systems. This has drastic consequences for the inference of parameters of a model when its dynamics lacks…

Statistical Mechanics · Physics 2016-11-15 Simon L. Dettmer , H. Chau Nguyen , Johannes Berg

We disclose a new class of patterns, called patched patterns, in arrays of non-locally coupled excitable units with attractive and repulsive interactions. Self-organization process involves formation of two types of patches, majority and…

Pattern Formation and Solitons · Physics 2022-09-28 Igor Franović , Sebastian Eydam

We explore a mechanism of pattern formation arising in processes described by a system of a single reaction-diffusion equation coupled with ordinary differential equations. Such systems of equations arise from the modeling of interactions…

Analysis of PDEs · Mathematics 2020-07-15 Steffen Härting , Anna Marciniak-Czochra

The theory of complex networks and of disordered systems is used to study the stability and dynamical properties of a simple model of material flow networks defined on random graphs. In particular we address instabilities that are…

Disordered Systems and Neural Networks · Physics 2009-11-13 Kartik Anand , Tobias Galla

GTPase molecules are important regulators in cells that continuously run through an activation/deactivation and membrane-attachment/membrane-detachment cycle. Activated GTPase is able to localize in parts of the membranes and to induce cell…

Analysis of PDEs · Mathematics 2011-12-08 Andreas Rätz , Matthias Röger