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This work investigates electron transport through chiral electrostatic potentials by modeling the system in three spatial dimensions and demonstrates that chirality-induced orbital selectivity (CIOS) produces pronounced enantiospecific…

Mesoscale and Nanoscale Physics · Physics 2025-09-10 Namgee Cho , James Lim , Martin B. Plenio

Molecular Dynamics simulations of water molecules in nanometre sized cylindrical channels connecting two reservoirs show that the permeation of water is very sensitive to the channel radius and to electric polarization of the embedding…

Soft Condensed Matter · Physics 2009-11-07 Rosalind Allen , Simone Melchionna , Jean-Pierre Hansen

The interplay between electrostatic interactions and orientational correlations is studied for a model system of charged rods positioned on a chain, using Monte Carlo simulation techniques. It is shown that the coupling brings about the…

Soft Condensed Matter · Physics 2009-11-13 Hossein Fazli , Ramin Golestanian , Mohammad R. Kolahchi

Ion channels orchestrate the communication between cells and their environment. These are special proteins capable of changing their shape to allow ions to pass through membranes in response to stimuli like membrane tension. As the letters…

Biological Physics · Physics 2024-09-17 Uğur Çetiner

Traditionally, ion-selectivity in nanopores and nanoporous membranes is understood to be a consequence of Debye overlap, in which the Debye screening length is comparable to the nanopore radius somewhere along the length of the nanopore(s).…

Soft Condensed Matter · Physics 2020-08-05 Anthony R. Poggioli , Alessandro Siria , Lyderic Bocquet

Perm-selective ion transportation in a nanoscale structure has been extensively studied with aids of nanofabrication technology for a decade. While theoretical and experimental advances pushed the phenomenon to seminal innovative…

Applied Physics · Physics 2020-01-29 Wonseok Kim , Jungeun Lee , Gun Yong Sung , Sung Jae Kim

The study of the electrical double layer lies at the heart of colloidal and interfacial science. The standard mean-field Poisson-Boltzmann (PB) theory is incapable of modeling many phenomena originated from ion correlation. An important…

Soft Condensed Matter · Physics 2022-09-26 Nikhil R. Agrawal , Rui Wang

The effect of dipolar interactions in hexagonal arrays of Ni nanowires has been investigated by means of Monte Carlo simulations combined with a scaling technique, which allows the investigation of the internal structure of the wires. A…

Materials Science · Physics 2009-11-11 M. Bahiana , S. Allende , F. S. Amaral , D. Altbir

We revisit the classical problem of diffusion-limited ion transport to a membrane (or electrode) by considering the effects of charged side walls. Using simple mathematical models and numerical simulations, we identify three basic…

Fluid Dynamics · Physics 2015-05-30 E. Victoria Dydek , Boris Zaltzman , Isaak Rubinstein , D. S. Deng , Ali Mani , Martin Z. Bazant

Recently, it has been suggested that ion channel selectivity filter may exhibit quantum coherence, which may be appropriate to explain ion selection and conduction processes. Potassium channels play a vital role in many physiological…

Quantum Physics · Physics 2022-05-31 Mina Seifi , Ali Soltanmanesh , Afshin Shafiee

In quantum wires, such as metallic nanotubes, the optical absorption of the transverse polarization is controlled by the depolarization effect which stems from the redistribution of conduction electrons around the circumference of the…

Mesoscale and Nanoscale Physics · Physics 2017-12-01 L. Shan , E. G. Mishchenko

The complexation of a polyelectrolyte with an oppositely charged spherical macroion is studied for both salt free and salty solutions. When a polyelectrolyte winds around the macroion, its turns repel each other and form an almost…

Soft Condensed Matter · Physics 2009-10-31 T. T. Nguyen , B. I. Shklovskii

We combine quantum-chemical calculations and molecular dynamics simulations to consider aqueous ion flow across non-axisymmetric nanopores in monolayer graphene and MoS$_2$. When the pore-containing membrane is subject to uniaxial tensile…

Applied Physics · Physics 2020-04-30 A. Smolyanitsky , A. Fang , A. F. Kazakov , E. Paulechka

Hybrid ionic-electronic conductors have the potential to generate memory effects and neuronal behavior. The functionality of these mixed materials depends on ion motion through thin polarizable channels. Here, we explore different…

The study of selection and gating in potassium channels is a very important issue in modern biology. Indeed such structures are known in all types of cells in all organisms where they play many important functional roles. The mechanism of…

Cell Behavior · Quantitative Biology 2015-05-30 D. Andreucci , D. Bellaveglia , E. N. M. Cirillo , S. Marconi

The purpose of this work is to create a model of a nanofluidic transistor which is able to mimic the effects of pH on nanopore conductance. The pH of the electrolyte is an experimentally controllable parameter through which the charge…

Mesoscale and Nanoscale Physics · Physics 2019-10-02 Dávid Fertig , Mónika Valiskó , Dezső Boda

We consider elongated cylindrical particles, modeling e.g. DNA fragments or nano-rods, while translocating under the action of an externally applied voltage through a solid state nanopore. Particular emphasis is put on the concomitant…

Soft Condensed Matter · Physics 2013-07-15 Sebastian Getfert , Thomas Töws , Peter Reimann

The problem of DNA-DNA interaction mediated by divalent counterions is studied using computer simulation. Although divalent counterions cannot condense free DNA molecules in solution, we show that if DNA configurational entropy is…

Biomolecules · Quantitative Biology 2011-03-29 SeIl Lee , Tung T Le , Toan T Nguyen

We investigate the ionic current modulation in DNA nanopore translocation setups by numerically solving the electrokinetic mean-field equations for an idealized model. Specifically, we study the dependence of the ionic current on the…

Soft Condensed Matter · Physics 2021-10-13 Kai Szuttor , Patrick Kreissl , Christian Holm

We report amplification of biomolecular recognition signal in lithographically defined silicon nanochannel devices. The devices are configured as field effect transistors (FET) in the reversed source-drain bias region. The measurement of…

Biological Physics · Physics 2008-02-14 Yu Chen , Xihua Wang , Mi K. Hong , Shyamsunder Erramilli , Carol Rosenberg , Pritiraj Mohanty