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This paper investigates the motion of falling leaves through modeling using papers and the corresponding data collected from more than four thousands experiments. Two series of experiments were designed in order to study the relationship…

Popular Physics · Physics 2011-11-11 Pedram Razavi

In this work, a new model for macroscopic plant tissue growth based on dynamical Riemannian geometry is presented. We treat 1D and 2D tissues as continuous, deformable, growing geometries for sizes larger than 1mm. The dynamics of the…

Tissues and Organs · Quantitative Biology 2016-02-05 Julia Pulwicki

Modeling the spontaneous evolution of morphology in natural systems and its preservation by proportionate growth remains a major scientific challenge. Yet, it is conceivable that if the basic mechanisms of growth and the coupled kinetic…

Soft Condensed Matter · Physics 2020-12-30 Virginia von Streng , Rami Abi-Akl , Bianca Giovanardi , Tal Cohen

Rapid advance of experimental techniques provides an unprecedented in-depth view into complex developmental processes. Still, little is known on how the complexity of multicellular organisms evolved by elaborating developmental programs and…

Molecular Networks · Quantitative Biology 2021-07-16 Somya Mani , Tsvi Tlusty

In many growth processes particles are highly mobile in an active layer at the surface, but are relatively immobile once incorporated in the bulk. We study models in which atoms are allowed to interact, equilibrate, and order on the…

Soft Condensed Matter · Physics 2009-10-31 Mehran Kardar

Leaves of vascular plants are arranged regularly around stems, a phenomenon known as phyllotaxis. A constant angle between two successive leaves is called divergence angle. On the one side, the divergence angle $\alpha_0$ of an initial…

Biological Physics · Physics 2017-07-19 Takuya Okabe

We consider a free boundary problem for a system of PDEs, modeling the growth of a biological tissue. A morphogen, controlling volume growth, is produced by specific cells and then diffused and absorbed throughout the domain. The geometric…

Analysis of PDEs · Mathematics 2017-11-22 Alberto Bressan , Marta Lewicka

Living biological tissue is a complex system, constantly growing and changing in response to external and internal stimuli. These processes lead to remarkable and intricate changes in shape. Modeling and understanding both natural and…

Computer Vision and Pattern Recognition · Computer Science 2025-04-07 Edwin Tay , Nazli Tümer , Amir A. Zadpoor

Automatic plant recognition and disease analysis may be streamlined by an image of a complete, isolated leaf as an initial input. Segmenting leaves from natural images is a hard problem. Cluttered and complex backgrounds: often composed of…

Computer Vision and Pattern Recognition · Computer Science 2017-09-20 N. Anantrasirichai , Sion Hannuna , Nishan Canagarajah

The models introduced in this paper describe a uniform distribution of plant stems competing for sunlight. The shape of each stem, and the density of leaves, are designed in order to maximize the captured sunlight, subject to a cost for…

Optimization and Control · Mathematics 2021-04-23 Alberto Bressan , Sondre T. Galtung , Audun Reigstad , Johanna Ridder

Most biological tissues grow by the synthesis of new material close to the tissue's interface, where spatial interactions can exert strong geometric influences on the local rate of growth. These geometric influences may be mechanistic, or…

Numerical Analysis · Mathematics 2020-05-28 Mohd Almie Alias , Pascal R Buenzli

A dissipative particle dynamics (DPD) model for the quantitative simulation of biofilm growth controlled by substrate (nutrient) consumption, advective and diffusive substrate transport, and hydrodynamic interactions with fluid flow…

Computational Physics · Physics 2018-08-03 Zhijie Xu , Paul Meakin , Alexandre Tartakovsky , Timothy. D. Scheibe

This study presents the approach to analyzing the evolution of an arbitrary complex system whose behavior is characterized by a set of different time-dependent factors. The key requirement for these factors is only that they must contain an…

Data Analysis, Statistics and Probability · Physics 2020-12-01 Anatolii V. Mokshin , Vladimir V. Mokshin , Diana A. Mirziyarova

We propose an evolutionary mechanism of phyllotaxis, regular arrangement of leaves on a plant stem. It is shown that the phyllotactic pattern with the Fibonacci sequence has a selective advantage, for it involves the least number of…

Biological Physics · Physics 2015-03-17 Takuya Okabe

Plasticity-led evolution is a form of evolution where a change in the environment induces novel traits via phenotypic plasticity, after which the novel traits are genetically accommodated over generations under the novel environment. This…

Populations and Evolution · Quantitative Biology 2023-01-18 Eden Tian Hwa Ng , Akira R. Kinjo

Plant phenotyping refers to a quantitative description of the plants properties, however in image-based phenotyping analysis, our focus is primarily on the plants anatomical, ontogenetical and physiological properties.This technique…

Computer Vision and Pattern Recognition · Computer Science 2022-10-25 Petros N. Tamvakis , Chairi Kiourt , Alexandra D. Solomou , George Ioannakis , Nestoras C. Tsirliganis

The root is an important organ of a plant since it is responsible for water and nutrient uptake. Analyzing and modelling variabilities in the geometry and topology of roots can help in assessing the plant's health, understanding its growth…

Graphics · Computer Science 2021-01-26 Guan Wang , Hamid Laga , Jinyuan Jia , Stanley J. Miklavcic , Anuj Srivastava

We introduce a general theoretical framework to study the shape dynamics of actively growing and remodeling surfaces. Using this framework we develop a physical model for growing bacterial cell walls and study the interplay of cell shape…

Biological Physics · Physics 2016-04-08 Shiladitya Banerjee , Norbert F. Scherer , Aaron R. Dinner

We present an approach to leaf level segmentation of images of Arabidopsis thaliana plants based upon detected edges. We introduce a novel approach to edge classification, which forms an important part of a method to both count the leaves…

Computer Vision and Pattern Recognition · Computer Science 2019-04-08 Jonathan Bell , Hannah M. Dee

In this paper, we employ Probabilistic Neural Network (PNN) with image and data processing techniques to implement a general purpose automated leaf recognition algorithm. 12 leaf features are extracted and orthogonalized into 5 principal…

Artificial Intelligence · Computer Science 2007-07-31 Stephen Gang Wu , Forrest Sheng Bao , Eric You Xu , Yu-Xuan Wang , Yi-Fan Chang , Qiao-Liang Xiang