Related papers: Random Ancestor Trees
Let $\tau$n be a random tree distributed as a Galton-Watson tree with geometric offspring distribution conditioned on {Zn = an} where Zn is the size of the n-th generation and (an, n $\in$ N *) is a deterministic positive sequence. We study…
We review the recent fast progress in statistical physics of evolving networks. Interest has focused mainly on the structural properties of random complex networks in communications, biology, social sciences and economics. A number of giant…
There has been considerable recent interest in the properties of networks, such as citation networks and the worldwide web, that grow by the addition of vertices, and a number of simple solvable models of network growth have been studied.…
A dynamic model for a random network evolving in continuous time is defined where new vertices are born and existing vertices may die. The fitness of a vertex is defined as the accumulated in-degree of the vertex and a new vertex is…
We present a simple model of network growth and solve it by writing down the dynamic equations for its macroscopic characteristics like the degree distribution and degree correlations. This allows us to study carefully the percolation…
In this paper, we propose an evolving network model growing fast in units of module, based on the analysis of the evolution characteristics in real complex networks. Each module is a small-world network containing several interconnected…
In several real-world networks like the Internet, WWW etc., the number of links grow in time in a non-linear fashion. We consider growing networks in which the number of outgoing links is a non-linear function of time but new links between…
We study the growth of a directed network, in which the growth is constrained by the cost of adding links to the existing nodes. We propose a new preferential-attachment scheme, in which a new node attaches to an existing node i with…
Accessibility percolation is a new type of percolation problem inspired by evolutionary biology. To each vertex of a graph a random number is assigned and a path through the graph is called accessible if all numbers along the path are in…
Let $\T_{n}$ be the set of rooted labeled trees on $\set{0,...,n}$. A maximal decreasing subtree of a rooted labeled tree is defined by the maximal subtree from the root with all edges being decreasing. In this paper, we study a new…
Phylogenetic networks are generalizations of phylogenetic trees that allow the representation of reticulation events such as horizontal gene transfer or hybridization, and can also represent uncertainty in inference. A subclass of these,…
Tree-child networks are a recently-described class of directed acyclic graphs that have risen to prominence in phylogenetics (the study of evolutionary trees and networks). Although these networks have a number of attractive mathematical…
We study the Krapivsky-Redner (KR) network growth model but where new nodes can connect to any number of existing nodes, $m$, picked from a power-law distribution $p(m)\sim m^{-\alpha}$. Each of the $m$ new connections is still carried out…
Preferential attachment is a popular model of growing networks. We consider a generalized model with random node removal, and a combination of preferential and random attachment. Using a high-degree expansion of the master equation, we…
Approaches from statistical physics are applied to investigate the structure of network models whose growth rules mimic aspects of the evolution of the world-wide web. We first determine the degree distribution of a growing network in which…
Phylogenetic networks are a type of leaf-labelled, acyclic, directed graph used by biologists to represent the evolutionary history of species whose past includes reticulation events. A phylogenetic network is tree-child if each non-leaf…
We consider NCA labeling schemes: given a rooted tree $T$, label the nodes of $T$ with binary strings such that, given the labels of any two nodes, one can determine, by looking only at the labels, the label of their nearest common…
We analyse the statistical properties of genealogical trees in a neutral model of a closed population with sexual reproduction and non-overlapping generations. By reconstructing the genealogy of an individual from the population evolution,…
Are biological networks different from other large complex networks? Both large biological and non-biological networks exhibit power-law graphs (number of nodes with degree k, N(k) ~ k-b) yet the exponents, b, fall into different ranges.…
Rooted phylogenetic networks provide an explicit representation of the evolutionary history of a set $X$ of sampled species. In contrast to phylogenetic trees which show only speciation events, networks can also accommodate reticulate…