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This paper proposes a multilevel sampling algorithm for fiber sampling problems in algebraic statistics, inspired by Henry Wynn's suggestion to adapt multilevel Monte Carlo (MLMC) ideas to discrete models. Focusing on log-linear models, we…
We propose a multilevel Markov chain Monte Carlo (MCMC) method for the Bayesian inference of random field parameters in PDEs using high-resolution data. Compared to existing multilevel MCMC methods, we additionally consider level-dependent…
This work presents an efficient approach for accelerating multilevel Markov Chain Monte Carlo (MCMC) sampling for large-scale problems using low-fidelity machine learning models. While conventional techniques for large-scale Bayesian…
This paper is to give an overview of AMG methods for solving large scale systems of equations such as those from the discretization of partial differential equations. AMG is often understood as the acronym of "Algebraic Multi-Grid", but it…
The numerical simulation of structural mechanics applications via finite elements usually requires the solution of large-size and ill-conditioned linear systems, especially when accurate results are sought for derived variables interpolated…
We design and implement a parallel algebraic multigrid method for isotropic graph Laplacian problems on multicore Graphical Processing Units (GPUs). The proposed AMG method is based on the aggregation framework. The setup phase of the…
This paper provides a unified and detailed presentation of root-node style algebraic multigrid (AMG). Algebraic multigrid is a popular and effective iterative method for solving large, sparse linear systems that arise from discretizing…
Discrete-state, continuous-time Markov models are becoming commonplace in the modelling of biochemical processes. The mathematical formulations that such models lead to are opaque, and, due to their complexity, are often considered…
Stochastic optimization in learning and inference often relies on Markov chain Monte Carlo (MCMC) to approximate gradients when exact computation is intractable. However, finite-time MCMC estimators are biased, and reducing this bias…
This paper develops a new algebraic multigrid (AMG) method for sparse least-squares systems of the form $A=G^TG$ motivated by challenging applications in scientific computing where classical AMG methods fail. First we review and relate the…
We describe main issues and design principles of an efficient implementation, tailored to recent generations of Nvidia Graphics Processing Units (GPUs), of an Algebraic Multigrid (AMG) preconditioner previously proposed by one of the…
The scalable solution of large sparse linear systems is a bottleneck in scientific computing and graph analysis. While algebraic multigrid (AMG) offers optimal linear scaling, its performance is severely constrained by the trade-off between…
In this paper, we consider a classical form of optimal algebraic multigrid (AMG) interpolation that directly minimizes the two-grid convergence rate and compare it with the so-called ideal form that minimizes a certain weak approximation…
In this paper, a full (nested) multigrid scheme is proposed to solve eigenvalue problems. The idea here is to use the multilevel correction method to transform the solution of eigenvalue problem to a series of solutions of the corresponding…
We present a scalable block preconditioning strategy for the trace system coming from the high-order hybridized discontinuous Galerkin (HDG) discretization of incompressible resistive magnetohydrodynamics (MHD). We construct the block…
Modeling complex multiway relationships in large-scale networks is becoming more and more challenging in data science. The multilinear PageRank problem, arising naturally in the study of higher-order Markov chains, is a powerful framework…
Algebraic multigrid (AMG) methods derive their optimal efficiency from the interplay between a relaxation process and a corresponding coarse grid correction. In many standard formulations, relaxation and coarse-graining are analyzed and…
This paper proposes an Adaptive-Growth Randomized Neural Network (AG-RaNN) method for computing multivalued solutions of nonlinear first-order PDEs with hyperbolic characteristics, including quasilinear hyperbolic balance laws and…
Efficient numerical solvers for sparse linear systems are crucial in science and engineering. One of the fastest methods for solving large-scale sparse linear systems is algebraic multigrid (AMG). The main challenge in the construction of…
We present some accelerated variants of fixed point iterations for computing the minimal non-negative solution of the unilateral matrix equation associated with an M/G/1-type Markov chain. These variants derive from certain staircase…