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How multicellular life forms evolved out from unicellular ones constitutes a major problem in our understanding of the evolution of our biosphere. A recent set of experiments involving yeast cell populations has shown that selection for…

Populations and Evolution · Quantitative Biology 2015-11-10 Salva Duran-Nebreda , Ricard V. Solé

Cellular automata can show well known features of quantum mechanics, such as a linear updating rule that resembles a discretized form of the Schr\"odinger equation together with its conservation laws. Surprisingly, a whole class of…

Quantum Physics · Physics 2016-08-26 Hans-Thomas Elze

Cellular automata and other discrete dynamical systems have long been studied as models of emergent complexity. Recently, neural cellular automata have been proposed as models to investigate the emerge of a more general artificial…

Cellular Automata and Lattice Gases · Physics 2025-07-28 Sanyam Jain , Stefano Nichele

We study the statistics of ecosystems with a variable number of co-evolving species. The species interact in two ways: by prey-predator relationships and by direct competition with similar kinds. The interaction coefficients change slowly…

Adaptation and Self-Organizing Systems · Physics 2015-06-26 Michael Lassig , Ugo Bastolla , Susanna C. Manrubia , Angelo Valleriani

A simple relation of the order of $n$ abstract objects generates an $n-2$ dimensional basis of three dimensional vectors. A cellular automaton-like model of evolution of this system is postulated. During this evolution, some quantities…

Cellular Automata and Lattice Gases · Physics 2017-08-14 Marek Pietrow

Any algorithm (in the sense of Gurevich's abstract-state-machine axiomatization of classical algorithms) operating over any arbitrary unordered domain can be simulated by a dynamic cellular automaton, that is, by a pattern-directed cellular…

Logic in Computer Science · Computer Science 2015-04-14 Nachum Dershowitz , Evgenia Falkovich

A simple mechanism for the emergence of complexity in cellular automata out of predictable dynamics is described. This leads to unfold the concept of conditional predictability for systems whose trajectory can only be piecewise known. The…

Cellular Automata and Lattice Gases · Physics 2015-06-17 Vladimir Garcia-Morales

This paper presents a real-time simulation involving ''protozoan-like'' cells that evolve by natural selection in a physical 2D ecosystem. Selection pressure is exerted via the requirements to collect mass and energy from the surroundings…

Neural and Evolutionary Computing · Computer Science 2023-05-23 Dylan Cope

Artificial swarm systems have been extensively studied and used in computer science, robotics, engineering and other technological fields, primarily as a platform for implementing robust distributed systems to achieve pre-defined…

Neural and Evolutionary Computing · Computer Science 2025-02-04 Hiroki Sayama

We introduce a new continuous cellular automaton that presents self-organized criticality. It is one-dimensional, totally deterministic, without any kind of embedded randomness, not even in the initial conditions. This system is in the same…

Statistical Mechanics · Physics 2009-10-31 Maria de Sousa Vieira

A mathematical model of interacting species filling ecological niches left by the extinction of others is introduced. Species organize themselves into genera of all sizes. The size of a genus on average grows linearly with its age,…

Condensed Matter · Physics 2008-02-03 Susanna Manrubia , Maya Paczuski

A key challenge in modern computing is to develop systems that address complex, dynamic problems in a scalable and efficient way, because the increasing complexity of software makes designing and maintaining efficient and flexible systems…

Other Computer Science · Computer Science 2015-05-19 Gerard Briscoe , Paolo Dini

We introduce an individual-based model of a complex ecological community with random interactions. The model contains a large number of species, each with a finite population of individuals, subject to discrete reproduction and death…

Populations and Evolution · Quantitative Biology 2023-07-19 Ferran Larroya , Tobias Galla

Biological and social systems are structured at multiple scales, and the incentives of individuals who interact in a group may diverge from the collective incentive of the group as a whole. Mechanisms to resolve this tension are responsible…

Populations and Evolution · Quantitative Biology 2023-05-31 Daniel B. Cooney , Simon A. Levin , Yoichiro Mori , Joshua B. Plotkin

Evolutionary complexity is here measured by the number of trials/evaluations needed for evolving a logical gate in a non-linear medium. Behavioural complexity of the gates evolved is characterised in terms of cellular automata behaviour. We…

Neural and Evolutionary Computing · Computer Science 2010-11-23 Andy Adamatzky , Larry Bull

Cellular automata are a discrete dynamical system which models massively parallel computation. Much attention is devoted to computations with small time complexity for which the parallelism may provide further possibilities. In this paper,…

Formal Languages and Automata Theory · Computer Science 2012-08-15 Anaël Grandjean , Gaétan Richard , Véronique Terrier

Statistical analysis indicates that the fossil extinction record is compatible with a distribution of extinction events whose frequency is related to their size by a power law with an exponent close to two. This result is in agreement with…

adap-org · Physics 2008-02-03 M. E. J. Newman

A new kind of cellular automaton (CA) for the study of the dynamics of urban systems is proposed. The state of a cell is not described using a finite set, but by means of continuum variables. A population sector is included, taking into…

Cellular Automata and Lattice Gases · Physics 2007-05-23 Alberto Vancheri , Paolo Giordano , Denise Andrey , Sergio Albeverio

When making predictions about ecosystems, we often have available a number of different ecosystem models that attempt to represent their dynamics in a detailed mechanistic way. Each of these can be used as simulators of large-scale…

Living systems operate in a critical dynamical regime -- between order and chaos -- where they are both resilient to perturbation, and flexible enough to evolve. To characterize such critical dynamics, the established 'structural theory' of…

Molecular Networks · Quantitative Biology 2022-01-28 Santosh Manicka , Manuel Marques-Pita , Luis M. Rocha