Related papers: The entropic cost to tie a knot
The native conformation of structured proteins is stabilized by a complex network of interactions. We analyzed the elementary patterns that constitute such network and ranked them according to their importance in shaping protein sequence…
We work in the smooth category. Let $N$ be a closed connected orientable 4-manifold with torsion free $H_1$, where $H_q := H_q(N; \mathbb Z)$. Our main result is a readily calculable classification of embeddings $N\to\mathbb R^7$ up to…
Notions of circuit complexity and cost play a key role in quantum computing and simulation where they capture the (weighted) minimal number of gates that is required to implement a unitary. Similar notions also become increasingly prominent…
We study the scaling of the entanglement entropy in different classes of one-dimensional fermionic quasiperiodic systems with and without pairing, focusing on multifractal critical points/phases. We find that the entanglement entropy scales…
Consider a knot $K$ in $S^3$ with uniformly distributed electric charge. Whilst solutions to the Laplace equation in terms of Dirichlet integrals are readily available, it is still of theoretical and physical interest to understand the…
A general method is presented for modeling high entropy alloys as ensembles of randomly sampled, ordered configurations on a given lattice. Statistical mechanics is applied post hoc to derive the ensemble properties as a function of…
A partition is a $t$-core partition if $t$ is not one of its hook lengths. Let $c_t(N)$ be the number of $t$-core partitions of $N$. In 1999, Stanton conjectured $c_t(N) \le c_{t+1}(N)$ if $4 \le t \ne N-1$. This was proved for $t$ fixed…
The complex eikonal equation in $(3+1)$ dimensions is investigated. It is shown that this equation generates many multi soliton configurations with arbitrary value of the Hopf index. In general, these eikonal hopfions do not have the…
The self-assembly of hard polyhedral particles confined to a flat interface is studied using Monte Carlo simulations. The particles are pinned to the interface by restricting their movement in the direction perpendicular to it while…
We propose a novel combinatorial algorithm for efficient generation of Hamiltonian walks and cycles on a cubic lattice, modeling the conformations of lattice toy proteins. Through extensive tests on small lattices (allowing complete…
It has been suggested recently that knots might exist as stable soliton solutions in a simple three-dimensional classical field theory, opening up a wide range of possible applications in physics and beyond. We have re-examined and extended…
We show that approximating the trace norm contraction coefficient of a quantum channel within a constant factor is NP-hard. Equivalently, this shows that determining the optimal success probability for encoding a bit in a quantum system…
Recent studies classify the topology of proteins by analysing the distribution of their projections using knotoids. The approximation of this distribution depends on the number of projection directions that are sampled. Here we investigate…
We give an infinite family of knots such that for any given $r \geq 3$, the family contains a knot which can be embedded on a hexagonal $r$-mosaic, but cannot fit on a hexagonal $r$-mosaic in an embedding that achieves its crossing number.…
We show that the number of distinct topological states associated to a given knotted defect, $L$, in a nematic liquid crystal is equal to the determinant of the link $L$. We give an interpretation of these states, demonstrate how they may…
We study the current rectification of particles moving in a pulsating channel under the in uence of an applied force. We have shown the existence of diferent rectification scenarios in which entropic and energetic effects compete. The…
We study the entanglement entropy of random partitions in one- and two-dimensional critical fermionic systems. In an infinite system we consider a finite, connected (hypercubic) domain of linear extent $L$, the points of which with…
Knots are deeply entangled with every branch of science. One of the biggest open challenges in knot theory is to formalise a knot invariant that can unambiguously and efficiently distinguish any two knotted curves. Additionally, the…
Knot theory provides a powerful tool for the understanding of topological matters in biology, chemistry, and physics. Here knot theory is introduced to describe topological phases in the quantum spin system. Exactly solvable models with…
We have used Langevin dynamics to simulate the forced translocation of linked polymer rings through a narrow pore. For fixed size (i.e. fixed number of monomers) the translocation time depends on the link type and on whether the rings are…