Related papers: Review of haplotype complementarity under mutation…
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We reexamine the constraints on mixing between electron and muon or tau neutrinos from shock-reheating and r-process nucleosynthesis in supernovae. To this end neutrino flavor evolution is described by nonlinear equations following from a…
Conventional population genetics considers the evolution of a limited number of genotypes corresponding to phenotypes with different fitness. As model phenotypes, in particular RNA secondary structure, have become computationally tractable,…
To investigate the structural dynamics of the homology pairing of polymers, we mod- eled the scenario of homologous chromosome pairings during meiosis in Schizosaccharomyces pombe, one of the simplest model organisms of eukaryotes. We…
Reporting on a computer--assisted search for nonpositively curved CW complexes of intermediate rank conducted some years ago. Not intended for publication.
Mutational neighbourhoods in genotype-phenotype (GP) maps are widely believed to be more likely to share characteristics than expected from random chance. Such genetic correlations should, as John Maynard Smith famously pointed out,…
I argue that, despite repeated claims of Ibata et al., the globular cluster NGC 2419 does not pose a problem for modified Newtonian dynamics (MOND). I present a new polytropic model with a running polytropic index. This model provides an…
This note responds to Schwartz and Hutchison's Comment (arXiv:2403.06001) on our article (DOI:10.1002/adma.202309393). We think differences have arisen not in the experimental results themselves but in their interpretation: our more…
The presence of phenomena analogous to phase transition in Statistical Mechanics, has been suggested in the evolution of a polygenic trait under stabilizing selection, mutation and genetic drift. By using numerical simulations of a model…
The aim of this article is to study degeneration of the variations of Hodge structure associated to a proper K\"ahler semistable morphism. We prove that the weight filtrations constructed in the author's previous paper coincide with the…
A probability model is presented for the dynamics of mutation-selection balance in a haploid infinite-population infinite-sites setting sufficiently general to cover mutation-driven changes in full age-specific demographic schedules. The…
A tractable nonparametric prior over densities is introduced which is closed under sampling and exhibits proper posterior asymptotics.
Review at session Pa7, Glasgow ICHEP conference
In the absence of selection, the structure of allelic diversity is described by the elegant sampling formula of Ewens. This formula has helped shape our expectations of empirical patterns of molecular variation. Along with coalescent…
Let $\mathcal{A} $ be a complexified-real arrangement of lines in $\mathbb{C}^2.$ Let $H$ be any line in $ \mathcal{A} $. Then, form a new complexified-real arrangement $ \mathcal{B}_H = \mathcal{A} \cup \mathcal{C} $ where $ \mathcal{C}…
Arbitrary conditioning is an important problem in unsupervised learning, where we seek to model the conditional densities $p(\mathbf{x}_u \mid \mathbf{x}_o)$ that underly some data, for all possible non-intersecting subsets $o, u \subset…
Two complementary approaches to the theory of heavy quarkonia are discussed. The nonrelativistic potential models give amazingly accurate predictions, but lack a theoretical justification. The expansion in powers of $v/c$ is theoretically…
Neutrino mixing in the standard model extensions, both renormalizable and effective, with arbitrary numbers of the singlet and left-handed doublet neutrinos is investigated in a systematic fashion. The charged and neutral (the Z and Higgs…
Replication helps ensure that a genotype-phenotype association observed in a genome-wide association (GWA) study represents a credible association and is not a chance finding or an artifact due to uncontrolled biases. We discuss…
We present a construction for the composition of subsequential transducers (representing conditional probabilistic models) with subsequential failure transducers (representing probabilistic models). Under certain conditions, satisfied by…