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Catalytically active colloids maintain non-equilibrium conditions in which they produce and deplete chemicals and hence effectively act as sources and sinks of molecules. While individual colloids that are symmetrically coated do not…

Soft Condensed Matter · Physics 2015-06-11 Rodrigo Soto , Ramin Golestanian

We discuss the phenomenon of spontaneous self-compactification in a model colloidal system, proposed in a recent work on DNA-mediated self-assembly. We focus on the effect of thermal fluctuations on the stability of membrane-like…

Soft Condensed Matter · Physics 2007-05-23 Juyong Park , Alexei V. Tkachenko

Under-actuated compliant robotic systems offer a promising approach to mitigating actuation and control challenges by harnessing pre-designed, embodied dynamic behaviors. This paper presents Flix-Walker, a novel, untethered,…

Robotics · Computer Science 2025-07-04 Yuhao Jiang , Fuchen Chen , Jamie Paik , Daniel M. Aukes

Different collective behaviors emerging from the unknown have been examined in networks of mobile agents in recent years. Mobile systems, far from being limited to modeling and studying various natural and artificial systems in motion and…

Adaptation and Self-Organizing Systems · Physics 2025-06-25 Venceslas Nguefoue Meli , Thierry Njougouo , Steve J. Kongni , Patrick Louodop , Hilaire Bertrand Fotsin , Hilda A. Cerdeira

We propose a new model of self-organized criticality. A particle is dropped at random on a lattice and moves along directions specified by arrows at each site. As it moves, it changes the direction of the arrows according to fixed rules. On…

Statistical Mechanics · Physics 2009-10-28 V. B. Priezzhev , Deepak Dhar , Abhishek Dhar , Supriya Krishnamurthy

We analyze the motion of individual beads of a polymer chain using a discrete version of De Gennes' reptation model that describes the motion of a polymer through an ordered lattice of obstacles. The motion within the tube can be evaluated…

Soft Condensed Matter · Physics 2016-08-15 U. Ebert , L. Schäfer , A. Baumgärtner

We report molecular dynamics simulations of a gel-forming mixture of ellipsoidal patchy particles with different functionality. We show that in this model, which disfavors the formation of bond-loops, elapsed time during irreversible…

Disordered Systems and Neural Networks · Physics 2009-03-09 Silvia Corezzi , Cristiano De Michele , Emanuela Zaccarelli , Piero Tartaglia , Francesco Sciortino

Homophily, the tendency of humans to attract each other when sharing similar features, traits, or opinions has been identified as one of the main driving forces behind the formation of structured societies. Here we ask to what extent…

Statistical Mechanics · Physics 2023-02-08 Jan Korbel , Simon D. Lindner , Tuan Minh Pham , Rudolf Hanel , Stefan Thurner

This work presents a microscale approach for simulating the dielectrophoresis (DEP) assembly of polarizable particles under an external electric field. The model is shown to capture interesting dynamical and topological features, such as…

Self-avoiding walks are studied on the 3-simplex fractal lattice as a model of linear polymer conformations in a dilute, non-homogeneous solution. A model is supplemented with bending energies and attractive-interaction energies between…

Statistical Mechanics · Physics 2023-02-21 Dušanka Marčetić

We study the self-assembly behaviour of patchy particles with `protein-like' interactions that can be considered as a minimal model for the assembly of viral capsids and other shell-like protein complexes. We thoroughly explore the…

Soft Condensed Matter · Physics 2010-01-21 Alex W. Wilber , Jonathan P. K. Doye , Ard A. Louis , Anna C. F. Lewis

We study numerically and analytically a model of self-propelled polar disks on a substrate in two dimensions. The particles interact via isotropic repulsive forces and are subject to rotational noise, but there is no aligning interaction.…

Soft Condensed Matter · Physics 2014-02-24 Yaouen Fily , M. Cristina Marchetti

Autonomous oscillations in biological systems may have a biochemical origin or result from an interplay between force-generating and visco-elastic elements. In molecular motor assemblies the force-generating elements are molecular engines…

Biological Physics · Physics 2007-05-23 Andrej Vilfan , Erwin Frey

Helical motifs are ubiquitious in macromolecular systems. The mechanism of spontaneous emergence of helicity is unknown, especially in cases where torsional interactions are absent. Emergence of helical order needs coordinated organization…

Soft Condensed Matter · Physics 2023-04-13 Debarshi Mitra , Apratim Chatterji

In geometrically frustrated assemblies, equilibrium self-limitation manifests in the form of a minimum in the free energy per subunit at a finite, multi-subunit size which results from the competition between the elastic costs of…

Soft Condensed Matter · Physics 2023-08-15 Michael Wang , Gregory Grason

A general near-field thermal electromagnetic transport formalism that is independent of the size, shape and number of heat sources is derived. The formalism is based on fluctuational electrodynamics, where fluctuating currents due to…

Computational Physics · Physics 2016-05-25 Sheila Edalatpour , John DeSutter , Mathieu Francoeur

Topological Interlocking assemblies are arrangements of blocks kinematically constrained by a fixed frame, such that all rigid body motions of each block are constrained only by its permanent contact with other blocks and the frame. In the…

Computational Engineering, Finance, and Science · Computer Science 2025-04-25 Tom Goertzen , Domen Macek , Lukas Schnelle , Meike Weiß , Stefanie Reese , Hagen Holthusen , Alice C. Niemeyer

Emergent behaviors occur in a vast array of systems across many scales, and are of fundamental physical importance because of the intrinsic difficulty in linking microscopic system properties to macroscopic behaviors. Here we study the…

Materials Science · Physics 2016-10-05 N. Khalid Ahmed , Greg van Anders , Elizabeth R. Chen , Sharon C. Glotzer

Both legged locomotion and slithering motions typically utilize periodic gaits -- repeating cycles of body shape change that produce a net motion through the world. Legged locomotion can be viewed from the perspective of piece-wise contact…

Robotics · Computer Science 2022-05-03 Shai Revzen , Dan Zhao , Glenna Clifton , Brian Bittner , Nick Gravish

Self-assembly is a process which is ubiquitous in natural, especially biological systems. It occurs when groups of relatively simple components spontaneously combine to form more complex structures. While such systems have inspired a large…

Computational Geometry · Computer Science 2018-07-19 Jerome Durand-Lose , Jacob Hendricks , Matthew J. Patitz , Ian Perkins , Michael Sharp
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