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Related papers: Evolution of Feedback Loops in Oscillatory Systems

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Natural organisms can convert environmental stimuli into sensory feedback to regulate their body and realize active adaptivity. However, realizing such a feedback-regulation mechanism in synthetic material systems remains a grand challenge.…

Robotics · Computer Science 2024-12-23 Jianfeng Yang , Haotian Pi , Zixuan Deng , Hongshuang Guo , Wan Shou , Hang Zhang , Hao Zeng

Habituation - a phenomenon in which a dynamical system exhibits a diminishing response to repeated stimulations that eventually recovers when the stimulus is withheld - is universally observed in living systems from animals to unicellular…

Adaptation and Self-Organizing Systems · Physics 2024-07-26 Matthew Smart , Stanislav Y. Shvartsman , Martin Mönnigmann

In this paper, we study the positivity and (uniform) exponential stability of a large class of perturbed semigroups. Our approach is essentially based on the feedback theory of infinite-dimensional linear systems. The obtained results are…

Functional Analysis · Mathematics 2021-03-31 Abed Boulouz , Hamid Bounit , Said Hadd

Many biological systems can sense periodical variations in a stimulus input and produce well-timed, anticipatory responses after the input is removed. Such systems show memory effects for retaining timing information in the stimulus and…

Neurons and Cognition · Quantitative Biology 2015-09-09 Ying-Jen Yang , Chun-Chung Chen , Pik-Yin Lai , C. K. Chan

Feedback is ubiquitous in both biological and engineered control systems. In biology, in addition to typical feedback between plant and controller, we observe feedback pathways within control systems, which we call internal feedback…

This paper concerns the reliability of a pair of coupled oscillators in response to fluctuating inputs. Reliability means that an input elicits essentially identical responses upon repeated presentations regardless of the network's initial…

Chaotic Dynamics · Physics 2007-08-23 Kevin K. Lin , Eric Shea-Brown , Lai-Sang Young

Unlike many physical nonequilibrium systems, in biological systems, the coupling to external energy sources is not a fixed parameter but adaptively controlled by the system itself. We do not have theoretical frameworks that allow for such…

Populations and Evolution · Quantitative Biology 2025-06-30 Ankit Dhanuka , Avi I. Flamholz , Arvind Murugan , Akshit Goyal

Feedback loops are known as a versatile tool for controlling transport in small systems, which usually have large intrinsic fluctuations. Here we investigate the control of a temporal correlation function, the waiting time distribution,…

Mesoscale and Nanoscale Physics · Physics 2016-04-13 Tobias Brandes , Clive Emary

Multiple stable states - the coexistence of two or more distinct ecological configurations under identical environmental conditions - have attracted sustained interest in ecology, yet the field still lacks a unified framework connecting…

Populations and Evolution · Quantitative Biology 2026-05-08 Jennifer Paige , Denis D. Patterson , Alan Hastings

Auto-regulatory feedback loops are one of the most common network motifs. A wide variety of stochastic models have been constructed to understand how the fluctuations in protein numbers in these loops are influenced by the kinetic…

Subcellular Processes · Quantitative Biology 2020-04-22 James Holehouse , Zhixing Cao , Ramon Grima

Understanding computational capabilities of simple biological circuits, such as the regulatory circuits of single-cell organisms, remains an active area of research. Recent theoretical work has shown that a simple regulatory architecture…

Biological Physics · Physics 2022-11-24 Fang Yu , Mikhail Tikhonov

Oscillator models are central to the study of system properties such as entrainment or synchronization. Due to their nonlinear nature, few system-theoretic tools exist to analyze those models. The paper develops a sensitivity analysis for…

Dynamical Systems · Mathematics 2024-05-03 Pierre Sacré , Rodolphe Sepulchre

Control theory arose from a need to control synthetic systems. From regulating steam engines to tuning radios to devices capable of autonomous movement, it provided a formal mathematical basis for understanding the role of feedback in the…

Negative and positive transcriptional feedback loops are present in natural and synthetic genetic oscillators. A single gene with negative transcriptional feedback needs a time delay and sufficiently strong nonlinearity in the transmission…

Molecular Networks · Quantitative Biology 2011-12-23 Jesús M. Miró-Bueno , Alfonso Rodríguez-Patón

In its broadest definition, systems biology is the application of a `systems' way of thinking about and doing cell biology. By implication, this also invites us to consider a systems approach in the context of medicine and the treatment of…

Tissues and Organs · Quantitative Biology 2007-05-23 Peter Wellstead , Rick Middleton , Olaf Wolkenhauer

Many natural, complex systems are remarkably stable thanks to an absence of feedback acting on their elements. When described as networks, these exhibit few or no cycles, and associated matrices have small leading eigenvalues. It has been…

Physics and Society · Physics 2017-06-12 Samuel Johnson , Nick S. Jones

Multiple organs in a living system respond to environmental changes, and the signals from the organs regulate the physiological environment. Inspired by this biological feedback, we propose a simple autonomous system of active rotators to…

Statistical Mechanics · Physics 2020-03-02 Taegeun Song , Heetae Kim , Seung-Woo Son , Junghyo Jo

Unstoppable feedback loops and tipping points in socio-ecological systems are the main threats to sustainability. These behaviors have been extensively studied, notably to predict, and arguably deviate, dead-end trajectories. Behind the…

Dynamical Systems · Mathematics 2023-05-11 Olivier Hamant

Many intracellular processes continue to oscillate during the cell cycle. Although it is not well-understood how they are affected by discontinuities in the cellular environment, the general assumption is that oscillations remain robust…

Molecular Networks · Quantitative Biology 2014-09-25 David S. Tourigny

The derivation of a new family of magnetic fields inducing exactly solvable spin evolutions is presented. The conditions for which these fields generate the evolution loops (dynamical processes for which any spin state evolves cyclically)…

Quantum Physics · Physics 2008-10-13 D. J. Fernandez C. , O. Rosas-Ortiz