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The study of biological cells in terms of mesoscopic, nonequilibrium, nonlinear, stochastic dynamics of open chemical systems provides a paradigm for other complex, self-organizing systems with ultra-fast stochastic fluctuations, short-time…

Chemical Physics · Physics 2014-11-06 Hong Qian

Empirical observations show that ecological communities can have a huge number of coexisting species, also with few or limited number of resources. These ecosystems are characterized by multiple type of interactions, in particular…

Populations and Evolution · Quantitative Biology 2018-05-18 Chengyi Tu , Samir Suweis , Jacopo Grillib , Marco Formentin , Amos Maritan

Empirical observations show that ecological communities can have a huge number of coexisting species, also with few or limited number of resources. These ecosystems are characterized by multiple type of interactions, in particular…

Populations and Evolution · Quantitative Biology 2018-05-21 Chengyi Tu , Samir Suweis , Jacopo Grilli , Marco Formentin , Amos Maritan

Switched linear hyperbolic partial differential equations are considered in this paper. They model infinite dimensional systems of conservation laws and balance laws, which are potentially affected by a distributed source or sink term. The…

Optimization and Control · Mathematics 2014-10-01 Christophe Prieur , Antoine Girard , Emmanuel Witrant

We study the emergence of cell differentiation under the assumption of the existence of a given number of tradeoffs between genes encoding different functions. In the model the viability of colonies is determined by the capability of their…

Populations and Evolution · Quantitative Biology 2017-06-06 André Amado , Paulo R. A. Campos

The biological requirements for an ecosystem to develop and maintain species diversity are in general unknown. Here we consider a model ecosystem of sessile and mutually excluding organisms competing for space [Mathiesen et al. Phys. Rev.…

Populations and Evolution · Quantitative Biology 2012-09-10 Namiko Mitarai , Joachim Mathiesen , Kim Sneppen

Coexistence of competing species is, due to unavoidable fluctuations, always transient. In this Letter, we investigate the ultimate survival probabilities characterizing different species in cyclic competition. We show that they often obey…

Populations and Evolution · Quantitative Biology 2009-01-30 Maximilian Berr , Tobias Reichenbach , Martin Schottenloher , Erwin Frey

Cyclic, nonhierarchical interactions among biological species represent a general mechanism by which ecosystems are able to maintain high levels of biodiversity. However, species coexistence is often possible only in spatially extended…

Populations and Evolution · Quantitative Biology 2015-03-17 Daniel Groselj , Frank Jenko , Erwin Frey

The paper deals with a multiple species Lotka-Volterra model with infinite distributed delays and feedback controls, for which we assume a weak form of diagonal dominance of the instantaneous negative intra-specific terms over the infinite…

Classical Analysis and ODEs · Mathematics 2013-07-29 Teresa Faria , Yoshiaki Muroya

In complex ecological communities, species may self-organize into clusters or clumps where highly similar species can coexist. The emergence of such species clusters can be captured by the interplay between neutral and niche theories. Based…

Statistical Mechanics · Physics 2026-04-16 Shing Yan Li , Mehran Kardar , Zhijie Feng , Washington Taylor

We investigate species-rich mathematical models of ecosystems. While much of the existing literature focuses on the properties of equilibrium fixed points, persistent dynamics (e.g., limit cycles or chaos) have also been observed, both in…

Adaptation and Self-Organizing Systems · Physics 2025-09-10 Robin Delabays , Philippe Jacquod

In this paper we show that the dynamics of a class of kinetic compartmental models with bounded capacities, monotone reaction rates and a strongly connected interconnection structure is persistent. The result is based on the chemical…

Dynamical Systems · Mathematics 2022-01-25 G. Szederkenyi , B. Acs , Gy. Liptak , M. A. Vaghy

We examine the two-dimensional extension of the model of Kessler and Sander of competition between two species identical except for dispersion rates. In this class of models, the spatial inhomogeneity of reproduction rates gives rise to an…

Populations and Evolution · Quantitative Biology 2015-06-12 Shlomit Weisman , David A. Kessler

We consider a Lotka-Volterra food chain model with possibly intra-specific competition in a stochastic environment represented by stochastic differential equations. In the non-degenerate setting, this model has already been studied by A.…

Probability · Mathematics 2021-11-18 Michel Benaïm , Antoine Bourquin , Dang H. Nguyen

It is known that the competitive exclusion principle holds for a large kind of models involving several species competing for a single resource in an homogeneous environment. Various works indicate that the coexistence is possible in an…

Analysis of PDEs · Mathematics 2014-07-22 François Castella , Sten Madec , Yvan Lagadeuc

In this paper nonstandard finite difference (NSFD) schemes of two metapopulation models are constructed. The stability properties of the discrete models are investigated by the use of a generalization of Lyapunov stability theorem. Due to…

Numerical Analysis · Mathematics 2017-01-23 Quang A Dang , Manh Tuan Hoang

In this paper, we study extinction in dynamical systems generated by reaction networks. We introduce two notions: weak extinction and strong extinction, and relate them to the structure of the underlying network through Lyapunov functions…

Dynamical Systems · Mathematics 2026-01-14 Pranav Agarwal , Gheorghe Craciun , Abhishek Deshpande , Jiaxin Jin

Let $(X_t)_{t \geq 0}$ be a continuous time Markov process on some metric space $M,$ leaving invariant a closed subset $M_0 \subset M,$ called the {\em extinction set}. We give general conditions ensuring either "Stochastic persistence"…

Probability · Mathematics 2023-10-26 Michel Benaim

Using a set of heterogeneous competing systems with intra-system cooperation and inter-system aggression, we show how the coevolution of the system parameters (degree of organization and conditions for aggression) depends on the rate of…

Adaptation and Self-Organizing Systems · Physics 2015-05-13 Jose M. Albornoz , Antonio Parravano

This paper investigates the competition of two species in a heterogeneous environment subject to the effect of harvesting. The most realistic harvesting case is connected with the intrinsic growth rate, and the harvesting functions are…

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