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In this short essay, we discuss some basic features of cognitive activity at several different space-time scales: from neural networks in the brain to civilizations. One motivation for such comparative study is its heuristic value. Attempts…

Artificial Intelligence · Computer Science 2017-09-12 Dmitrii Yu. Manin , Yuri I. Manin

We analyse growing networks ranging from collaboration graphs of scientists to the network of similarities defined among the various transcriptional profiles of living cells. For the explicit demonstration of the scale-free nature and…

Statistical Mechanics · Physics 2009-11-10 I. Farkas , I. Derenyi , H. Jeong , Z. Neda , Z. N. Oltvai , E. Ravasz , A. Schubert , A. -L. Barabasi , T. Vicsek

Multimodal brain networks characterize complex connectivities among different brain regions from both structural and functional aspects and provide a new means for mental disease analysis. Recently, Graph Neural Networks (GNNs) have become…

Neurons and Cognition · Quantitative Biology 2022-05-25 Yanqiao Zhu , Hejie Cui , Lifang He , Lichao Sun , Carl Yang

We describe a graph-based neural acceleration technique for nonnegative matrix factorization that builds upon a connection between matrices and bipartite graphs that is well-known in certain fields, e.g., sparse linear algebra, but has not…

Machine Learning · Computer Science 2022-02-02 Jens Sjölund , Maria Bånkestad

We provide a comprehensive review of the existing literature on memory-augmented GNNs. We review these works through the lens of psychology and neuroscience, which has several established theories on how multiple memory systems and…

Machine Learning · Computer Science 2023-07-18 Guixiang Ma , Vy A. Vo , Theodore Willke , Nesreen K. Ahmed

Network data can be conveniently modeled as a graph signal, where data values are assigned to nodes of a graph that describes the underlying network topology. Successful learning from network data is built upon methods that effectively…

Machine Learning · Computer Science 2021-05-26 Fernando Gama , Elvin Isufi , Geert Leus , Alejandro Ribeiro

A set of fixed points of the Hopfield type neural network was under investigation. Its connection matrix is constructed with regard to the Hebb rule from a highly symmetric set of the memorized patterns. Depending on the external parameter…

Biological Physics · Physics 2007-05-23 Hong-Liang Lu , Xi-Jun Qiu

Selecting informative nodes over large-scale networks becomes increasingly important in many research areas. Most existing methods focus on the local network structure and incur heavy computational costs for the large-scale problem. In this…

Methodology · Statistics 2018-10-02 Qingpo Cai , Jian Kang , Tianwei Yu

Different classes of communication network topologies and their representation in the form of adjacency matrix and its eigenvalues are presented. A self-organizing feature map neural network is used to map different classes of communication…

Neural and Evolutionary Computing · Computer Science 2007-05-23 W. Ali , R. J. Mondragon , F. Alavi

Characterizing the structural properties of neural networks is crucial yet poorly understood, and there are no well-established similarity measures between networks. In this work, we observe that neural networks can be represented as…

Machine Learning · Computer Science 2021-06-01 David Pérez-Fernández , Asier Gutiérrez-Fandiño , Jordi Armengol-Estapé , Marta Villegas

In recommender systems, user-item interactions can be modeled as a bipartite graph, where user and item nodes are connected by undirected edges. This graph-based view has motivated the rapid adoption of graph neural networks (GNNs), which…

We present a new distributed representation in deep neural nets wherein the information is represented in native form as a matrix. This differs from current neural architectures that rely on vector representations. We consider matrices as…

Machine Learning · Computer Science 2018-02-06 Kien Do , Truyen Tran , Svetha Venkatesh

The relationship between brain structure and function has been probed using a variety of approaches, but how the underlying structural connectivity of the human brain drives behavior is far from understood. To investigate the effect of…

Neurons and Cognition · Quantitative Biology 2018-11-15 Kanika Bansal , John D. Medaglia , Danielle S. Bassett , Jean M. Vettel , Sarah F. Muldoon

In problems involving approximation, completion, denoising, dimension reduction, estimation, interpolation, modeling, order reduction, regression, etc, we argue that the near-universal practice of assuming that a function, matrix, or tensor…

Numerical Analysis · Mathematics 2019-02-12 Ke Ye , Lek-Heng Lim

We consider the model of complex hyperbranched polymer structures formed on the basis of scale-free graphs, where functionalities (degrees) $k$ of nodes obey a power law decaying probability $p(k)\sim{k^{-\alpha}}$. Such polymer topologies…

Soft Condensed Matter · Physics 2025-09-16 V. Blavatska , Yu. Holovatch

We study complex networks under random matrix theory (RMT) framework. Using nearest-neighbor and next-nearest-neighbor spacing distributions we analyze the eigenvalues of adjacency matrix of various model networks, namely, random,…

Statistical Mechanics · Physics 2009-11-13 Sarika Jalan , Jayendra N. Bandyopadhyay

This paper describes how realistic neuromorphic networks can have their connectivity fully characterized in analytical fashion. By assuming that all neurons have the same shape and are regularly distributed along the two-dimensional…

Disordered Systems and Neural Networks · Physics 2007-05-23 Luciano da Fontoura Costa , Marconi Soares Barbosa

The study of dynamical systems on networks, describing complex interactive processes, provides insight into how network structure affects global behaviour. Yet many methods for network dynamics fail to cope with large or partially-known…

Physics and Society · Physics 2018-09-05 Neave O'Clery , Ye Yuan , Guy-Bart Stan , Mauricio Barahona

Diverse cognitive processes set different demands on locally segregated and globally integrated brain activity. However, it remains unclear how resting brains configure their functional organization to balance the demands on network…

Neurons and Cognition · Quantitative Biology 2022-04-25 Rong Wang , Mianxin Liu , Xinhong Cheng , Ying Wu , Andrea Hildebrandt , Changsong Zhou

Graphs are a powerful data structure for representing relational data and are widely used to describe complex real-world systems. Probabilistic Graphical Models (PGMs) and Graph Neural Networks (GNNs) can both leverage graph-structured…

Machine Learning · Statistics 2025-08-26 Michela Lapenna , Caterina De Bacco
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