Related papers: Renormalisation group determination of the order o…
The denaturation transition which takes place in circular DNA is analyzed by extending the Poland-Scheraga model to include the winding degrees of freedom. We consider the case of a homopolymer whereby the winding number of the double…
A mesoscopic model for heterogeneous DNA denaturation is developed in the framework of the path integral formalism. The base pair stretchings are treated as one-dimensional, time dependent paths contributing to the partition function. The…
We analyze a semi-infinite one-dimensional random walk process with a biased motion that is incremental in one direction and long-range in the other. On a network with a fixed hierarchy of long-range jumps, we find with exact…
A classification of critical behavior is provided in systems for which the renormalization group equations are control-parameter dependent. It describes phase transitions in networks with a recursive, hierarchical structure but appears to…
The renormalization group has played an important role in the physics of the second half of the twentieth century both as a conceptual and a calculational tool. In particular it provided the key ideas for the construction of a qualitative…
Percolation refers to an interesting class of problems related to the properties of disordered systems, usually formulated in terms of objects randomly placed on an underlying lattice or continuum. Despite the simplicity of the setup, most…
Two different models exhibiting self-organized criticality are analyzed by means of the dynamic renormalization group. Although the two models differ by their behavior under a parity transformation of the order parameter, it is shown that…
Concerning renormalisation group theory applied to phase transitions, we examine the value of positive numerical and analytical evidence, the divergent short-wavelength behaviour of classical free fields and the absence of UV-divergences in…
The onset of intermediate states (denaturation bubbles) and their role during the melting transition of DNA are studied using the Peyrard-Bishop-Daxuois model by Monte Carlo simulations with no adjustable parameters. Comparison is made with…
The vulcanization transition - the crosslink-density-controlled equilibrium phase transition from the liquid to the amorphous solid state - is explored analytically from a renormalization group perspective. The analysis centers on a minimal…
We investigate solitons in Peyrard-Bishop model of DNA molecule using Renormalization group methods which provide a systematic way for perturbation analysis. Small amplitude expansion is carried out in both the continuous and discrete…
A theory for thermomechanical behavior of homogeneous DNA at thermal equilibrium predicts critical temperatures for denaturation under torque and stretch, phase diagrams for stable B--DNA, supercoiling, optimally stable torque, and the…
We discuss a renormalization procedure for random tensor networks, and show that the corresponding renormalization-group flow is given by the Hamiltonian vector flow of the canonical tensor model, which is a discretized model of quantum…
Diffusion models represent a class of generative models that produce data by denoising a sample corrupted by white noise. Despite the success of diffusion models in computer vision, audio synthesis, and point cloud generation, so far they…
Double stranded DNA chain is known to have nontrivial elasticity. We study the effect of this elasticity on the denaturation profile of DNA oligomer by constraining one base pair at one end of the oligomer to remain in unstretched (or…
Discrete amorphous materials are best described in terms of arbitrary networks which can be embedded in three dimensional space. Investigating the thermodynamic equilibrium as well as non-equilibrium behavior of such materials around second…
Percolation in a scale-free hierarchical network is solved exactly by renormalization-group theory, in terms of the different probabilities of short-range and long-range bonds. A phase of critical percolation, with algebraic…
We extend approximate next-to-next-to-leading order results for top-pair production to include the semi-leptonic decays of top quarks in the narrow-width approximation. The new hard-scattering kernels are implemented in a fully differential…
The denaturation of the double helix is a template for fundamental biological functions such as replication and transcription involving the formation of local fluctuational openings. The denaturation transition is studied for heterogeneous…
We present an analytical strong-disorder renormalization group theory of the quantum phase transition in the dissipative random transverse-field Ising chain. For Ohmic dissipation, we solve the renormalization flow equations analytically,…