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Structural organization and correlations are studied in very large packings of equally sized acrylic spheres, reconstructed in three-dimensions by means of X-ray computed tomography. A novel technique, devised to analyze correlations among…
In their seminal paper introducing the theory of random graphs, Erd\H{o}s and R\'{e}nyi considered the evolution of the structure of a random subgraph of $K_n$ as the density increases from $0$ to $1$, identifying two key points in this…
Adjacency polytopes, a.k.a. symmetric edge polytopes, associated with undirected graphs have been defined and studied in several seemingly independent areas including number theory, discrete geometry, and dynamical systems. In particular,…
We show that all the tangles in a finite graph or matroid can be distinguished by a single tree-decomposition that is invariant under the automorphisms of the graph or matroid. This comes as a corollary of a similar decomposition theorem…
In card-based cryptography, a deck of physical cards is used to achieve secure computation. A shuffle, which randomly permutes a card-sequence along with some probability distribution, ensures the security of a card-based protocol. The…
We give a construction of cyclic cocycles on convolution algebras twisted by gerbes over discrete translation groupoids. For proper \'etale groupoids, Tu and Xu provide a map between the periodic cyclic cohomology of a gerbe-twisted…
Configurations are necklaces with prescribed numbers of red and black beads. Among all possible configurations, the regular one plays an important role in many applications. In this paper, several aspects of regular configurations are…
Motivated by the question of how macromolecules assemble, the notion of an {\it assembly tree} of a graph is introduced. Given a graph $G$, the paper is concerned with enumerating the number of assembly trees of $G$, a problem that applies…
Deciding whether the union of two convex polyhedra is itself a convex polyhedron is a basic problem in polyhedral computations; having important applications in the field of constrained control and in the synthesis, analysis, verification…
We introduce an axiomatic theory of spherical diagrams as a tool to study certain combinatorial properties of polyhedra in $\mathbb R^3$, which are of central interest in the context of Art Gallery problems for polyhedra and other…
We introduce and study embeddings of graphs in finite projective planes, and present related results for some families of graphs including complete graphs and complete bipartite graphs. We also make connections between embeddings of graphs…
We use the differential algebra of polytopes to explain the known remarkable relation of the combinatorics of the associahedra and permutohedra with the universal compositional and multiplicative inversion formulas for the formal power…
We study an abstract notion of tree structure which lies at the common core of various tree-like discrete structures commonly used in combinatorics: trees in graphs, order trees, nested subsets of a set, tree-decompositions of graphs and…
Compound graphs are networks in which vertices can be grouped into larger subsets, with these subsets capable of further grouping, resulting in a nesting that can be many levels deep. In several applications, including biological workflows,…
The contour of a family of filters along a filter is a set-theoretic lower limit. Topologicity and regularity of convergences can be characterized with the aid of the contour operation. Contour inversion is studied, in particular, for…
This is a chapter in an upcoming Tamari Festscrift. Permutahedra are a class of convex polytopes arising naturally from the study of finite reflection groups, while generalized associahedra are a class of polytopes indexed by finite…
Twisted diagrams are "diagrams" with components in different categories. Structure maps are defined using auxiliary data which consists of functors relating the various categories to each other. Prime examples of the construction are…
In this article we review some problems in physics, chemistry and mathematics that lead naturally to a class of polyhedra which include the Platonic solids. Examples include the study of electrons on a sphere, cages of carbon atoms, central…
Every n-edge colored n-regular graph G naturally gives rise to a simple abstract n-polytope, the colorful polytope of G, whose 1-skeleton is isomorphic to G. The paper describes colorful polytope versions of the associahedron and…
The fundamental role of on-shell diagrams in quantum field theory has been recently recognized. On-shell diagrams, or equivalently bipartite graphs, provide a natural bridge connecting gauge theory to powerful mathematical structures such…