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Graph Neural Networks (GNNs) are a predominant method for graph representation learning. However, beyond subgraph frequency estimation, their application to network motif significance-profile (SP) prediction remains under-explored, with no…

Machine Learning · Computer Science 2025-07-11 Pedro C. Vieira , Miguel E. P. Silva , Pedro Manuel Pinto Ribeiro

We show that a simple Markov chain, the Glauber dynamics, can efficiently sample independent sets almost uniformly at random in polynomial time for graphs in a certain class. The class is determined by boundedness of a new graph parameter…

Discrete Mathematics · Computer Science 2020-12-07 Martin Dyer , Catherine Greenhill , Haiko Müller

Graph neural networks (GNNs) learn to represent nodes by aggregating information from their neighbors. As GNNs increase in depth, their receptive field grows exponentially, leading to high memory costs. Several existing methods address this…

Machine Learning · Computer Science 2025-07-16 Taraneh Younesian , Daniel Daza , Emile van Krieken , Thiviyan Thanapalasingam , Peter Bloem

As the popularity of graph data increases, there is a growing need to count the occurrences of subgraph patterns of interest, for a variety of applications. Many graphs are massive in scale and also fully dynamic (with insertions and…

Databases · Computer Science 2022-11-15 Kaixin Wang , Cheng Long , Da Yan , Jie Zhang , H. V. Jagadish

We study computational and sample complexity of parameter and structure learning in graphical models. Our main result shows that the class of factor graphs with bounded factor size and bounded connectivity can be learned in polynomial time…

Machine Learning · Computer Science 2012-07-09 Pieter Abbeel , Daphne Koller , Andrew Y. Ng

Given a large graph, a graph sample determines a subgraph with similar characteristics for certain metrics of the original graph. The samples are much smaller thereby accelerating and simplifying the analysis and visualization of large…

Distributed, Parallel, and Cluster Computing · Computer Science 2019-10-11 Kevin Gomez , Matthias Täschner , M. Ali Rostami , Christopher Rost , Erhard Rahm

Many applications in the field of statistics require Markov chain Monte Carlo methods. Determining appropriate starting values and run lengths can be both analytically and empirically challenging. A desire to overcome these problems has led…

Computation · Statistics 2012-03-09 James M. Flegal , Radu Herbei

A class of random graph models is considered, combining features of exponential-family models and latent structure models, with the goal of retaining the strengths of both of them while reducing the weaknesses of each of them. An open…

Computation · Statistics 2020-07-21 Sergii Babkin , Jonathan Stewart , Xiaochen Long , Michael Schweinberger

Spectral independence is a recently-developed framework for obtaining sharp bounds on the convergence time of the classical Glauber dynamics. This new framework has yielded optimal $O(n \log n)$ sampling algorithms on bounded-degree graphs…

Data Structures and Algorithms · Computer Science 2023-10-16 Ivona Bezáková , Andreas Galanis , Leslie Ann Goldberg , Daniel Štefankovič

Elliptical slice sampling, when adapted to linearly truncated multivariate normal distributions, is a rejection-free Markov chain Monte Carlo method. At its core, it requires analytically constructing an ellipse-polytope intersection. The…

Machine Learning · Computer Science 2024-07-16 Kaiwen Wu , Jacob R. Gardner

In this paper, we devise a novel lightweight Graph Convolutional Network (GCN) design dubbed as Multi-Rate Magnitude Pruning (MRMP) that jointly trains network topology and weights. Our method is variational and proceeds by aligning the…

Computer Vision and Pattern Recognition · Computer Science 2024-01-01 Hichem Sahbi

Sampled network data are widely used in empirical research because collecting complete network information is costly. However, empirical analyses based on sampled networks may lead to biased estimators. We propose a nonparametric imputation…

Econometrics · Economics 2026-05-12 Ge Sun , Weisheng Zhang

The statistical modeling of random networks has been widely used to uncover interaction mechanisms in complex systems and to predict unobserved links in real-world networks. In many applications, network connections are collected via…

Social and Information Networks · Computer Science 2023-03-21 Angus Chan , Tianxi Li

This study introduces an algorithm that generates undirected graphs with three main characteristics of real-world networks: scale-freeness, short distances between nodes (small-world phenomenon), and large clustering coefficients. The main…

Social and Information Networks · Computer Science 2025-02-27 João Pedro C. Morais , Ruben Interian

Sparse exchangeable graphs on $\mathbb{R}_+$, and the associated graphex framework for sparse graphs, generalize exchangeable graphs on $\mathbb{N}$, and the associated graphon framework for dense graphs. We develop the graphex framework as…

Statistics Theory · Mathematics 2016-11-04 Victor Veitch , Daniel M. Roy

Graphlets are induced subgraphs of a large network and are important for understanding and modeling complex networks. Despite their practical importance, graphlets have been severely limited to applications and domains with relatively small…

Social and Information Networks · Computer Science 2017-03-01 Ryan A. Rossi , Rong Zhou , Nesreen K. Ahmed

Full Bayesian computational inference for model determination in undirected graphical models is currently restricted to decomposable graphs, except for problems of very small scale. In this paper we develop new, more efficient methodology…

Computation · Statistics 2012-06-05 Peter J. Green , Alun Thomas

Node counting on a graph is subject to some fundamental theoretical limitations, yet a solution to such problems is necessary in many applications of graph theory to real-world systems, such as collective robotics and distributed sensor…

Distributed, Parallel, and Cluster Computing · Computer Science 2020-05-29 Arindam Saha , James A. R. Marshall , Andreagiovanni Reina

Inferring graph structure from observations on the nodes is an important and popular network science task. Departing from the more common inference of a single graph and motivated by social and biological networks, we study the problem of…

Machine Learning · Statistics 2020-10-19 Madeline Navarro , Yuhao Wang , Antonio G. Marques , Caroline Uhler , Santiago Segarra

In this paper, we consider the problem of counting and sampling structures in graphs. We define a class of "edge universal labeling problems"---which include proper $k$-colorings, independent sets, and downsets---and describe simple…

Data Structures and Algorithms · Computer Science 2020-08-20 Christine T. Cheng , Will Rosenbaum