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The metabolic networks are very well characterized for a large set of organisms, a unique case in within the large-scale biological networks. For this reason they provide a a very interesting framework for the construction of analytically…

Molecular Networks · Quantitative Biology 2007-05-23 Ginestra Bianconi , Riccardo Zecchina

We introduce a new method for predicting the formation of links in real-world networks, which we refer to as the method of effective transitions. This method relies on the theory of isospectral matrix reductions to compute the probability…

Social and Information Networks · Computer Science 2019-09-04 Bryn Balls-Barker , Benjamin Webb

The dynamics of diffusion in complex networks are widely studied to understand how entities, such as information, diseases, or behaviors, spread in an interconnected environment. Complex networks often present community structure, and tools…

Physics and Society · Physics 2025-12-09 Alina Dubovskaya , Caroline B. Pena , David J. P. O'Sullivan

Adaptive-network models are typically studied using deterministic differential equations which approximately describe their dynamics. In simulations, however, the discrete nature of the network gives rise to intrinsic noise which can…

Statistical Mechanics · Physics 2012-09-04 Tim Rogers , William Clifford-Brown , Catherine Mills , Tobias Galla

We review a collection of models of random simplicial complexes together with some of the most exciting phenomena related to them. We do not attempt to cover all existing models, but try to focus on those for which many important results…

Probability · Mathematics 2022-05-04 Omer Bobrowski , Dmitri Krioukov

We survey some of the concepts, methods, and applications of community detection, which has become an increasingly important area of network science. To help ease newcomers into the field, we provide a guide to available methodology and…

Physics and Society · Physics 2016-09-08 Mason A. Porter , Jukka-Pekka Onnela , Peter J. Mucha

In this manuscript we review new ideas and first results on application of the Graphical Models approach, originated from Statistical Physics, Information Theory, Computer Science and Machine Learning, to optimization problems of network…

Systems and Control · Computer Science 2017-02-08 Michael Chertkov , Sidhant Misra , Marc Vuffray , Dvijotham Krishnamurty , Pascal Van Hentenryck

The structure of interconnected systems and its impact on the system dynamics is a much-studied cross-disciplinary topic. Although various critical phenomena have been found in different models, the study on the connections between…

Statistical Mechanics · Physics 2020-08-03 Ming Li , Linyuan Lü , Youjin Deng , Mao-Bin Hu , Hao Wang , Matúš Medo , H. Eugene Stanley

We derive properties of Latent Variable Models for networks, a broad class of models that includes the widely-used Latent Position Models. These include the average degree distribution, clustering coefficient, average path length and degree…

Methodology · Statistics 2015-06-26 Riccardo Rastelli , Nial Friel , Adrian E. Raftery

Networks have attracted a burst of attention in the last decade, with applications to natural, social, and technological systems. While networks provide a powerful abstraction for investigating relationships and interactions, the…

Physics and Society · Physics 2010-04-09 Michael J. Barber , Manfred Paier , Thomas Scherngell

The oscillation model has been proposed as a theoretical framework for describing user dynamics in online social networks. This model can model the user dynamics generated by a particular network structure and allow its causal relationships…

Social and Information Networks · Computer Science 2021-05-11 Naoki Hirakura , Masaki Aida

We study the percolation in coupled networks with both inner-dependency and inter-dependency links, where the inner- and inter-dependency links represent the dependencies between nodes in the same or different networks, respectively. We…

Physics and Society · Physics 2016-05-09 Run-Ran Liu , Ming Li , Chun-Xiao Jia , Bing-Hong Wang

Critical phenomena in complex networks, and the emergence of dynamical abrupt transitions in the macroscopic state of the system are currently a subject of the outmost interest. We report evidence of an explosive phase synchronization in…

We study the extreme events taking place on complex networks. The transport on networks is modelled using random walks and we compute the probability for the occurance and recurrence of extreme events on the network. We show that the nodes…

Statistical Mechanics · Physics 2011-05-05 Vimal Kishore , M. S. Santhanam , R. E. Amritkar

Spreading phenomena on networks are essential for the collective dynamics of various natural and technological systems, from information spreading in gene regulatory networks to neural circuits or from epidemics to supply networks…

Physics and Society · Physics 2021-06-01 Justine Wolter , Benedict Lünsmann , Xiaozhu Zhang , Malte Schröder , Marc Timme

The study of random graphs has become very popular for real-life network modeling such as social networks or financial networks. Inhomogeneous long-range percolation (or scale-free percolation) on the lattice $\mathbb Z^d$, $d\ge1$, is a…

Probability · Mathematics 2014-09-29 Philippe Deprez , Rajat Subhra Hazra , Mario V. Wüthrich

Directed acyclic graphs are a fundamental class of networks that includes citation networks, food webs, and family trees, among others. Here we define a random graph model for directed acyclic graphs and give solutions for a number of the…

Physics and Society · Physics 2009-03-23 Brian Karrer , M. E. J. Newman

We introduce a model to study the delicate relation between the spreading of information and the formation of opinions in social systems. For this purpose, we propose a two-layer multiplex network model in which consensus dynamics takes…

Physics and Society · Physics 2019-07-03 David Soriano-Paños , Quantong Guo , Vito Latora , Jesús Gómez-Gardeñes

The success of new scientific areas can be assessed by their potential for contributing to new theoretical approaches and in applications to real-world problems. Complex networks have fared extremely well in both of these aspects, with…

Network models are used to study interconnected systems across many physical, biological, and social disciplines. Such models often assume a particular network-generating mechanism, which when fit to data produces estimates of…

Social and Information Networks · Computer Science 2022-01-17 Ryan E. Langendorf , Matthew G. Burgess