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We search for digital biomarkers from Parkinson's Disease by observing approximate repetitive patterns matching hypothesized step and stride periodic cycles. These observations were modeled as a cycle of hidden states with randomness…

Quantitative Methods · Quantitative Biology 2017-11-15 Avinash Bukkittu , Baihan Lin , Trung Vu , Itsik Pe'er

Hidden Markov models (HMMs) are commonly used for disease progression modeling when the true patient health state is not fully known. Since HMMs typically have multiple local optima, incorporating additional patient covariates can improve…

Machine Learning · Statistics 2021-10-05 Matt Baucum , Anahita Khojandi , Theodore Papamarkou

In hybrid HMM based speech recognition, LSTM language models have been widely applied and achieved large improvements. The theoretical capability of modeling any unlimited context suggests that no recombination should be applied in…

Audio and Speech Processing · Electrical Eng. & Systems 2020-04-03 Wei Zhou , Ralf Schlüter , Hermann Ney

Deep Neural Network--Hidden Markov Model (DNN-HMM) based methods have been successfully used for many always-on keyword spotting algorithms that detect a wake word to trigger a device. The DNN predicts the state probabilities of a given…

Sound · Computer Science 2021-03-01 Ashish Shrivastava , Arnav Kundu , Chandra Dhir , Devang Naik , Oncel Tuzel

VT (Viterbi training), or hard EM, is an efficient way of parameter learning for probabilistic models with hidden variables. Given an observation $y$, it searches for a state of hidden variables $x$ that maximizes $p(x,y \mid \theta)$ by…

Artificial Intelligence · Computer Science 2020-02-19 Taisuke Sato , Keiichi Kubota

Many different metrics exist for evaluating parsing results, including Viterbi, Crossing Brackets Rate, Zero Crossing Brackets Rate, and several others. However, most parsing algorithms, including the Viterbi algorithm, attempt to optimize…

cmp-lg · Computer Science 2008-02-03 Joshua Goodman

The Hidden Markov Model (HMM) is one of the most widely used statistical models for sequential data analysis. One of the key reasons for this versatility is the ability of HMM to deal with missing data. However, standard HMM learning…

Machine Learning · Statistics 2023-07-04 Binyamin Perets , Mark Kozdoba , Shie Mannor

The application of the hidden Markov model with various parameters in the segmentation task of QRS, ST, T, P, PQ, ISO complexes of electrocardiograms is considered. Models were trained using the Viterbi algorithm using the QT Database. For…

Signal Processing · Electrical Eng. & Systems 2020-05-12 N. S. Shlyankin , A. V. Gaidel

Consider the problem of predicting the next symbol given a sample path of length n, whose joint distribution belongs to a distribution class that may have long-term memory. The goal is to compete with the conditional predictor that knows…

Statistics Theory · Mathematics 2024-04-25 Yanjun Han , Tianze Jiang , Yihong Wu

Traditional Markov chain Monte Carlo (MCMC) sampling of hidden Markov models (HMMs) involves latent states underlying an imperfect observation process, and generates posterior samples for top-level parameters concurrently with nuisance…

Computation · Statistics 2016-01-13 Daniel Turek , Perry de Valpine , Christopher J. Paciorek

We present a polyphonic MIDI score-following algorithm capable of following performances with arbitrary repeats and skips, based on a probabilistic model of musical performances. It is attractive in practical applications of score following…

Artificial Intelligence · Computer Science 2014-07-08 Eita Nakamura , Tomohiko Nakamura , Yasuyuki Saito , Nobutaka Ono , Shigeki Sagayama

The article presents an application of Hidden Markov Models (HMMs) for pattern recognition on genome sequences. We apply HMM for identifying genes encoding the Variant Surface Glycoprotein (VSG) in the genomes of Trypanosoma brucei (T.…

Genomics · Quantitative Biology 2015-10-22 Andrea Mesa , Sebastián Basterrech , Gustavo Guerberoff , Fernando Alvarez-Valin

Hidden Markov Models (HMM) model a sequence of observations that are dependent on a hidden (or latent) state that follow a Markov chain. These models are widely used in diverse fields including ecology, speech recognition, and…

Optimization and Control · Mathematics 2024-09-05 Sidonie Foulon , Thérèse Truong , Anne-Louise Leutenegger , Hervé Perdry

In this project, we study the hidden Markov random field (HMRF) model and its expectation-maximization (EM) algorithm. We implement a MATLAB toolbox named HMRF-EM-image for 2D image segmentation using the HMRF-EM framework. This toolbox…

Computer Vision and Pattern Recognition · Computer Science 2012-12-20 Quan Wang

Online (also called "recursive" or "adaptive") estimation of fixed model parameters in hidden Markov models is a topic of much interest in times series modelling. In this work, we propose an online parameter estimation algorithm that…

Computation · Statistics 2011-02-16 Olivier Cappé

Hidden Markov Models, HMM's, are mathematical models of Markov processes with state that is hidden, but from which information can leak. They are typically represented as 3-way joint-probability distributions. We use HMM's as denotations of…

Logic in Computer Science · Computer Science 2023-06-22 Annabelle McIver , Carroll Morgan , Tahiry Rabehaja

We introduce the Reduced-Rank Hidden Markov Model (RR-HMM), a generalization of HMMs that can model smooth state evolution as in Linear Dynamical Systems (LDSs) as well as non-log-concave predictive distributions as in…

Machine Learning · Computer Science 2009-12-23 Sajid M. Siddiqi , Byron Boots , Geoffrey J. Gordon

Information seeking process is an important topic in information seeking behavior research. Both qualitative and empirical methods have been adopted in analyzing information seeking processes, with major focus on uncovering the latent…

Information Retrieval · Computer Science 2013-04-09 Shuguang Han , Zhen Yue , Daqing He

A hidden Markov model with trends is a hidden Markov model whose emission distributions are translated by a trend that depends on the current hidden state and on the current time. Contrary to standard hidden Markov models, such processes…

Statistics Theory · Mathematics 2021-12-17 Luc Lehéricy , Augustin Touron

Recognizing handwritten mathematical expressions (HMER) is a challenging task due to the inherent two-dimensional structure, varying symbol scales, and complex spatial relationships among symbols. In this paper, we present a self-supervised…

Computer Vision and Pattern Recognition · Computer Science 2025-09-01 Shree Mitra , Ritabrata Chakraborty , Nilkanta Sahu