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BioSimplify is an open source tool written in Java that introduces and facilitates the use of a novel model for sentence simplification tuned for automatic discourse analysis and information extraction (as opposed to sentence simplification…

Computation and Language · Computer Science 2011-07-29 Siddhartha Jonnalagadda , Graciela Gonzalez

Syntactic parsing is an important step in the automated text analysis which aims at information extraction. Quality of the syntactic parsing determines to a large extent the recall and precision of the text mining results. In this paper we…

Computation and Language · Computer Science 2020-08-18 Maria Biryukov

Accurate systems for extracting Protein-Protein Interactions (PPIs) automatically from biomedical articles can help accelerate biomedical research. Biomedical Informatics researchers are collaborating to provide metaservices and advance the…

Computation and Language · Computer Science 2010-03-18 Siddhartha Jonnalagadda , Graciela Gonzalez

Can language models read biomedical texts and explain the biomedical mechanisms discussed? In this work we introduce a biomedical mechanism summarization task. Biomedical studies often investigate the mechanisms behind how one entity (e.g.,…

Computation and Language · Computer Science 2023-01-13 Mohaddeseh Bastan , Nishant Shankar , Mihai Surdeanu , Niranjan Balasubramanian

Accessing medical literature is difficult for laypeople as the content is written for specialists and contains medical jargon. Automated text simplification methods offer a potential means to address this issue. In this work, we propose a…

Computation and Language · Computer Science 2023-02-14 Junru Lu , Jiazheng Li , Byron C. Wallace , Yulan He , Gabriele Pergola

The goal of text simplification (TS) is to transform difficult text into a version that is easier to understand and more broadly accessible to a wide variety of readers. In some domains, such as healthcare, fully automated approaches cannot…

Computation and Language · Computer Science 2020-10-22 Hoang Van , David Kauchak , Gondy Leroy

We consider the problem of learning to simplify medical texts. This is important because most reliable, up-to-date information in biomedicine is dense with jargon and thus practically inaccessible to the lay audience. Furthermore, manual…

Computation and Language · Computer Science 2021-04-14 Ashwin Devaraj , Iain J. Marshall , Byron C. Wallace , Junyi Jessy Li

Clinical notes are an efficient way to record patient information but are notoriously hard to decipher for non-experts. Automatically simplifying medical text can empower patients with valuable information about their health, while saving…

Sentences that present a complex syntax act as a major stumbling block for downstream Natural Language Processing applications whose predictive quality deteriorates with sentence length and complexity. The task of Text Simplification (TS)…

Computation and Language · Computer Science 2023-08-02 Christina Niklaus , Matthias Cetto , André Freitas , Siegfried Handschuh

Large language models demonstrate limited capability in proficiency-controlled sentence simplification, particularly when simplifying across large readability levels. We propose a framework that decomposes complex simplifications into…

Computation and Language · Computer Science 2026-02-10 Jingshen Zhang , Xin Ying Qiu , Lifang Lu , Zhuhua Huang , Yutao Hu , Yuechang Wu , JunYu Lu

We propose a new method for evaluating the readability of simplified sentences through pair-wise ranking. The validity of the method is established through in-corpus and cross-corpus evaluation experiments. The approach correctly identifies…

Computation and Language · Computer Science 2016-03-22 Sowmya Vajjala , Detmar Meurers

Text simplification has emerged as an increasingly useful application of AI for bridging the communication gap in specialized fields such as medicine, where the lexicon is often dominated by technical jargon and complex constructs. Despite…

Computation and Language · Computer Science 2023-10-27 Lorenzo Jaime Yu Flores , Heyuan Huang , Kejian Shi , Sophie Chheang , Arman Cohan

Text simplification reduces the language complexity of professional content for accessibility purposes. End-to-end neural network models have been widely adopted to directly generate the simplified version of input text, usually functioning…

Computation and Language · Computer Science 2021-07-08 Cristina Garbacea , Mengtian Guo , Samuel Carton , Qiaozhu Mei

Text Simplification improves the readability of sentences through several rewriting transformations, such as lexical paraphrasing, deletion, and splitting. Current simplification systems are predominantly sequence-to-sequence models that…

Computation and Language · Computer Science 2021-04-16 Mounica Maddela , Fernando Alva-Manchego , Wei Xu

Automated text simplification aims to produce simple versions of complex texts. This task is especially useful in the medical domain, where the latest medical findings are typically communicated via complex and technical articles. This…

Computation and Language · Computer Science 2023-10-19 Sebastian Joseph , Kathryn Kazanas , Keziah Reina , Vishnesh J. Ramanathan , Wei Xu , Byron C. Wallace , Junyi Jessy Li

Despite recent advances in natural language processing, many statistical models for processing text perform extremely poorly under domain shift. Processing biomedical and clinical text is a critically important application area of natural…

Computation and Language · Computer Science 2021-03-24 Mark Neumann , Daniel King , Iz Beltagy , Waleed Ammar

We propose a new sentence simplification task (Split-and-Rephrase) where the aim is to split a complex sentence into a meaning preserving sequence of shorter sentences. Like sentence simplification, splitting-and-rephrasing has the…

Computation and Language · Computer Science 2017-07-24 Shashi Narayan , Claire Gardent , Shay B. Cohen , Anastasia Shimorina

Reading levels are highly individual and can depend on a text's language, a person's cognitive abilities, or knowledge on a topic. Text simplification is the task of rephrasing a text to better cater to the abilities of a specific target…

Computation and Language · Computer Science 2023-07-10 Björn Engelmann , Fabian Haak , Christin Katharina Kreutz , Narjes Nikzad Khasmakhi , Philipp Schaer

Text simplification (TS) is the process of generating easy-to-understand sentences from a given sentence or piece of text. The aim of TS is to reduce both the lexical (which refers to vocabulary complexity and meaning) and syntactic (which…

Computation and Language · Computer Science 2023-04-17 Ciprian-Octavian Truică , Andrei-Ionut Stan , Elena-Simona Apostol

Overall, the two main contributions of this work include the application of sentence simplification to association extraction as described above, and the use of distributional semantics for concept extraction. The proposed work on concept…

Computation and Language · Computer Science 2011-09-13 Siddhartha Jonnalagadda
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