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We investigate entanglement detection when the local measurements only nearly correspond to those intended. This corresponds to a scenario in which measurement devices are not perfectly controlled, but nevertheless operate with bounded…

Quantum Physics · Physics 2022-06-22 Simon Morelli , Hayata Yamasaki , Marcus Huber , Armin Tavakoli

A quantitative understanding of how cells interact with their extracellular matrix via molecular bonds is fundamental for many important processes in cell biology and engineering. In these interactions, the deformability of cells and matrix…

Biological Physics · Physics 2022-07-13 Qiangzeng Huang , Jizeng Wang

Understanding mechanosensitivity, i.e. how cells sense the stiffness of their environment is very important, yet there is a fundamental difficulty in understanding its mechanism: to measure an elastic modulus one requires two points of…

Cell Behavior · Quantitative Biology 2015-06-17 Matteo Escude , Michelle K. Rigozzi , Eugene M. Terentjev

This work reports on two results. At first we revisit the Berg and Purcell calculation that provides a lower bound to the error in concentration measurement by cells, by considering the realistic case when the cell starts measuring the…

Subcellular Processes · Quantitative Biology 2022-04-06 Vaibhav Wasnik

The TGF-beta pathway plays a central role in tissue homeostasis and morphogenesis. It transduces a variety of extracellular signals into intracellular transcriptional responses that control a plethora of cellular processes, including cell…

Molecular Networks · Quantitative Biology 2007-05-23 Jose M. G. Vilar , Ronald Jansen , Chris Sander

Receptor-induced apoptosis is a complex signal transduction pathway involving numerous protein/protein interactions and post-transcriptional modifications. The response to death receptor stimulation varies significantly from one cell line…

Quantitative Methods · Quantitative Biology 2017-12-20 François Bertaux , Dirk Drasdo , Gregory Batt

The precision of concentration sensing is improved when cells communicate. Here we derive the physical limits to concentration sensing for cells that communicate over short distances by directly exchanging small molecules (juxtacrine…

Biological Physics · Physics 2017-03-15 Sean Fancher , Andrew Mugler

The adhesion of cells is mediated by membrane receptors that bind to complementary ligands in apposing cell membranes. It is generally assumed that the lateral diffusion of mobile receptor-ligand bonds in membrane-membrane adhesion zones is…

Soft Condensed Matter · Physics 2007-05-23 H. Krobath , G. J. Schuetz , R. Lipowsky , T. R. Weikl

A variety of complex mechanisms, from chemical reaction pathways to active fluctuations, orchestrate molecular transport in intracellular environments. Despite significant recent progress in visualizing and probing these processes, little…

Statistical Mechanics · Physics 2024-07-29 Ardra Suchitran , Sreekanth K Manikandan

Cells sense and predict their environment via energy-dissipating pathways. However, it is unclear whether dissipation helps or harms prediction. Here we study dissipation and prediction for a minimal sensory module of receptors that…

Molecular Networks · Quantitative Biology 2013-12-20 Nils B. Becker , Andrew Mugler , Pieter Rein ten Wolde

While Large Language Models (LLMs) are increasingly deployed for table-related tasks, the internal mechanisms enabling them to process linearized two-dimensional structured tables remain opaque. In this work, we investigate the process of…

Computation and Language · Computer Science 2026-02-10 Xuanliang Zhang , Dingzirui Wang , Keyan Xu , Qingfu Zhu , Wanxiang Che

Cell cell and cell matrix adhesions are fundamental in all multicellular organisms. They play a key role in cellular growth, differentiation, pattern formation and migration. Cell-cell adhesion is substantial in the immune response,…

Biological Physics · Physics 2019-05-30 Rita Ungai-Salanki , Beatrix Peter , Tamas Gerecsei , Norbert Orgovan , Robert Horvath , Balint Szabo

Laser-induced breakdown spectroscopy (LIBS) show enhancement in its signal, when the laser-induced plasma is confined/decelerated under the effect of an external steady magnetic field or in a small cavity. An enhancement in LIBS signal has…

Plasma Physics · Physics 2014-07-01 V. N. Rai , Jagdish P. Singh

Many eukaryotic cells are able to sense chemical gradients by directly measuring spatial concentration differences. The precision of such gradient sensing is limited by fluctuations in the binding of diffusing particles to specific…

Cell Behavior · Quantitative Biology 2010-06-04 Bo Hu , Wen Chen , Wouter-Jan Rappel , Herbert Levine

Molecular interactions are key to many chemical and biological processes like protein function. In many signaling processes they occur in sub-cellular areas displaying nanoscale organizations and involving molecular assemblies. The…

Living cells sense noisy biochemical signals crucial for survival, yet models incorporating intracellular signaling are limited. This study examines how cells sense chemotactic concentrations through phosphorylation readouts in Ca2+…

Subcellular Processes · Quantitative Biology 2025-08-22 Swoyam Srirupa , Pradeep , Vaibhav Wasnik

This paper studies microfluidic molecular communication receivers with finite-capacity Langmuir adsorption driven by an effective surface concentration. In the reaction-limited regime, we derive a closed-form single-pulse response kernel…

Signal Processing · Electrical Eng. & Systems 2026-01-19 Ruifeng Zheng , Pengjie Zhou , Pit Hofmann , Martín Schottlender , Fatima Rani , Juan A. Cabrera , Frank H. P. Fitzek

Nanoparticles with multiple ligands have been proposed for use in nanomedicine. The multiple targeting ligands on each nanoparticle can bind to several locations on a cell surface facilitating both drug targeting and uptake. Experiments…

Mesoscale and Nanoscale Physics · Physics 2015-05-18 Jack N. Waddell , Douglas G. Mullen , Bradford G. Orr , Mark M. Banaszak Holl , Leonard M. Sander

The faithful distribution of entanglement in continuous variable systems is essential to many quantum information protocols. As such, entanglement distillation and enhancement schemes are a cornerstone of many applications. The photon…

Quantum Physics · Physics 2018-06-07 Zacharie M. Leger , Aharon Brodutch , Amr S. Helmy

Adhesion processes of biological membranes that enclose cells and cellular organelles are essential for immune responses, tissue formation, and signaling. These processes depend sensitively on the binding constant K2D of the…

Biomolecules · Quantitative Biology 2015-11-30 Guang-Kui Xu , Jinglei Hu , Reinhard Lipowsky , Thomas R. Weikl
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