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In the present paper we bring together minimality conditions proposed in previous two papers and present some new minimality conditions for classical and virtual knots and links.

Geometric Topology · Mathematics 2007-05-23 Vassily Olegovich Manturov

Associating graph algebras to directed graphs leads to both covariant and contravariant functors from suitable categories of graphs to the category k-Alg of algebras and algebra homomorphisms. As both functors are often used at the same…

Rings and Algebras · Mathematics 2026-04-30 Gilles G. de Castro , Francesco D'Andrea , Piotr M. Hajac

In the present paper we give a simple proof of the fact that the set of virtual links with orientable atoms is closed. More precisely, the theorem states that if two virtual diagrams $K$ and $K'$ have orientable atoms and they are…

Geometric Topology · Mathematics 2011-01-04 D. Yu. Krylov , V. O. Manturov

Graphs are nowadays ubiquitous in the fields of signal processing and machine learning. As a tool used to express relationships between objects, graphs can be deployed to various ends: I) clustering of vertices, II) semi-supervised…

Machine Learning · Computer Science 2020-07-17 Carlos Lassance , Vincent Gripon , Gonzalo Mateos

As the scale of networked control systems increases and interactions between different subsystems become more sophisticated, questions of the resilience of such networks increase in importance. The need to redefine classical system and…

Systems and Control · Electrical Eng. & Systems 2022-05-26 Mohammad Pirani , Aritra Mitra , Shreyas Sundaram

We extend Milnor's mu-invariants of link homotopy to ordered (classical or virtual) tangles. Simple combinatorial formulas for mu-invariants are given in terms of counting trees in Gauss diagrams. Invariance under Reidemeister moves…

Geometric Topology · Mathematics 2015-05-20 Olga Kravchenko , Michael Polyak

Link prediction is an important learning task for graph-structured data. In this paper, we propose a novel topological approach to characterize interactions between two nodes. Our topological feature, based on the extended persistent…

Machine Learning · Computer Science 2021-06-15 Zuoyu Yan , Tengfei Ma , Liangcai Gao , Zhi Tang , Chao Chen

Graph grammars extend the theory of formal languages in order to model distributed parallelism in theoretical computer science. We show here that to certain classes of context-free and context-sensitive graph grammars one can associate a…

Formal Languages and Automata Theory · Computer Science 2015-03-02 Matilde Marcolli , Alexander Port

The notion of a welded link was introduced by Fenn, Rim\'anyi, and Rourke as an analogue of welded braids. A welded link is defined as an equivalence class of link diagrams that may contain virtual crossings, where the equivalence is…

Geometric Topology · Mathematics 2025-12-23 Naoko Kamada , Seiichi Kamada

In \cite{Kim} it is shown that knots in $S_{g} \times S^{1}$ can be presented by virtual diagrams with a decoration, so called, {\em double lines}. In this paper, we study the essential diagram for each knot in $S_{g} \times S^{1}$, which…

Geometric Topology · Mathematics 2025-12-09 Seongjeong Kim

We introduce and study knotoids. Knotoids are represented by diagrams in a surface which differ from the usual knot diagrams in that the underlying curve is a segment rather than a circle. Knotoid diagrams are considered up to Reidemeister…

Geometric Topology · Mathematics 2011-04-14 Vladimir Turaev

We relativise the Thomassen--Woess definition of accessibility in graphs, defining what it means for a graph to be accessible relative to a peripheral system. In the case of locally finite, quasi-transitive graphs, we characterise relative…

Combinatorics · Mathematics 2026-05-14 Joseph Paul MacManus

We consider intrinsic linking and knotting in the context of directed graphs. We construct an example of a directed graph that contains a consistently oriented knotted cycle in every embedding. We also construct examples of intrinsically…

Geometric Topology · Mathematics 2017-12-29 Thomas Fleming , Joel Foisy

We develop a calculus for diagrams of knotted objects. We define Arrow presentations, which encode the crossing informations of a diagram into arrows in a way somewhat similar to Gauss diagrams, and more generally w-tree presentations,…

Geometric Topology · Mathematics 2019-02-13 Jean-Baptiste Meilhan , Akira Yasuhara

We classify graphs that are 0, 1, or 2 edges short of being complete partite graphs with respect to intrinsic linking and intrinsic knotting. In addition, we classify intrinsic knotting of graphs on 8 vertices. For graphs in these families,…

Geometric Topology · Mathematics 2007-05-23 Thomas W. Mattman , Ryan Ottman , Matt Rodrigues

Graphs have a superior ability to represent relational data, like chemical compounds, proteins, and social networks. Hence, graph-level learning, which takes a set of graphs as input, has been applied to many tasks including comparison,…

Machine Learning · Computer Science 2023-05-26 Zhenyu Yang , Ge Zhang , Jia Wu , Jian Yang , Quan Z. Sheng , Shan Xue , Chuan Zhou , Charu Aggarwal , Hao Peng , Wenbin Hu , Edwin Hancock , Pietro Liò

We say that a graph is intrinsically knotted or completely 3-linked if every embedding of the graph into the 3-sphere contains a nontrivial knot or a 3-component link any of whose 2-component sublink is nonsplittable. We show that a graph…

Geometric Topology · Mathematics 2020-05-19 Ryo Hanaki , Ryo Nikkuni , Kouki Taniyama , Akiko Yamazaki

An unknotting operation is a local move such that any knot diagram can be transformed into a diagram of the trivial knot by a finite sequence of these operations plus some Reidemeister moves. It is known that for all $n \geq 2$ the…

Geometric Topology · Mathematics 2025-10-22 Danish Ali , Zhiqing Yang , Abid Hussain , Mohd Ibrahim Sheikh

Two welded (respectively virtual) link diagrams are homotopic if one may be transformed into the other by a sequence of extended Reidemeister moves, classical Reidemeister moves, and self crossing changes. In this paper, we extend Milnor's…

Geometric Topology · Mathematics 2009-02-14 H. A. Dye , Louis H. Kauffman

This article presents a survey of some recent results in the theory of spatial graphs. In particular, we highlight results related to intrinsic knotting and linking and results about symmetries of spatial graphs. In both cases we consider…

Geometric Topology · Mathematics 2018-08-14 Erica Flapan , Thomas Mattman , Blake Mellor , Ramin Naimi , Ryo Nikkuni