Related papers: Graph-Links
Given a group endowed with a Z/2-valued morphism we associate a Gauss diagram theory, and show that for a particular choice of the group these diagrams encode faithfully virtual knots on a given arbitrary surface. This theory contains all…
In this paper we formalize a combinatorial object for describing link diagrams called a Planar Diagram Code. PD-codes are used by the KnotTheory Mathematica package developed by Bar-Natan, et al. We present the set of PD-codes as a stand…
A book Chapter consisting of some of the main areas of research in graph theory applied to physics. It includes graphs in condensed matter theory, such as the tight-binding and the Hubbard model. It follows the study of graph theory and…
Cut-diagrams are diagrammatic objects, defined in dimensions 1 and 2, that generalize links in 3-space and surface-links in 4-space; in dimension 1, this coincides with the theory of welded links. Using cut-diagrams, we introduce an…
We say that a link $L_1$ is an s-major of a link $L_2$ if any diagram of $L_1$ can be transformed into a diagram of $L_2$ by changing some crossings and smoothing some crossings. This relation is a partial ordering on the set of all prime…
In previous work, the author defined the intersection graph of a chord diagram associated with string links (as in the theory of finite type invariants). In this paper, we classify the trees which can be obtained as intersection graphs of…
A virtual link may be defined as an equivalence class of diagrams, or alternatively as a stable equivalence class of links in thickened surfaces. We prove that a minimal crossing virtual link diagram has minimal genus across representatives…
This paper is an introduction to the subject of virtual knot theory, combined with a discussion of some specific new theorems about virtual knots. The new results are as follows: We prove, using a 3-dimensional topology approach that if a…
We follow the same technics we used before in \cite{AZ} of extending knot Floer homology to embedded graphs in a 3-manifold, by using the Kauffman topological invariant of embedded graphs by associating family of links and knots to a such…
Knot Theory is currently a very broad field. Even a long survey can only cover a narrow area. Here we concentrate on the path from Goeritz matrices to quasi-alternating links. On the way, we often stray from the main road and tell related…
Link homotopy has been an active area of research for knot theorists since its introduction by Milnor in the 1950s. We introduce a new equivalence relation on spatial graphs called component homotopy, which reduces to link homotopy in the…
In this paper we introduce a new invariant of virtual knots and links that is non-trivial for infinitely many virtuals, but is trivial on classical knots and links. The invariant is initially be expressed in terms of a relative of the…
We use planar 4-valent graphs and a graphical calculus involving such graphs to construct an invariant for balanced-oriented, knotted 4-valent graphs. Our invariant is an extension of the $sl(n)$ polynomial for classical knots and links. We…
In the past two decades, significant advances have been made in understanding the structural and functional properties of biological networks, via graph-theoretic analysis. In general, most graph-theoretic studies are conducted in the…
Manturov recently introduced the idea of a free knot, i.e. an equivalence class of virtual knots where equivalence is generated by crossing change and virtualization moves. He showed that if a free knot diagram is associated to a graph that…
We investigate some basic questions about the interaction of regular and rational relations on words. The primary motivation comes from the study of logics for querying graph topology, which have recently found numerous applications. Such…
In this paper, we propose a new type of graph, denoted as "embedded-graph", and its theory, which employs a distributed representation to describe the relations on the graph edges. Embedded-graphs can express linguistic and complicated…
We introduce a notion of intrinsic linking and knotting for virtual spatial graphs. Our theory gives two filtrations of the set of all graphs, allowing us to measure, in a sense, how intrinsically linked or knotted a graph is; we show that…
Despite the celebrated popularity of Graph Neural Networks (GNNs) across numerous applications, the ability of GNNs to generalize remains less explored. In this work, we propose to study the generalization of GNNs through a novel…
A knot diagram has an associated looped interlacement graph, obtained from the intersection graph of the Gauss diagram by attaching loops to the vertices that correspond to negative crossings. This construction suggests an extension of the…